Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393023
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Entry
139393023 CDS
T10872
Name
(RefSeq) caprin-2-like
KO
K18744
caprin-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
139393023
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GFIT
Other DBs
NCBI-GeneID:
139393023
NCBI-ProteinID:
XP_070997442
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Position
33:14096288..14103626
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AA seq
972 aa
AA seq
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MNPVGDTKCAHIGEDLNMVQLSPSPARDASPSPECSEKGRQGSPKAGSPKMGSHGGLSPL
QLALGASTTIYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAV
EKYDEVIHNLQFAQELHKTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLL
QTLLQHEHIRKDLLSARNPQLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDL
LEGKNKAVAGTTYKVLKAKLAKLMDCGYFDCVPPPPSKSPKKVEVPMTKKTVSETASLST
LMTSNKKDVPSREFLNRHYLPDTDPNGCRDTPVTQNWKAEFQAMKEQEPPDSWDIESDST
QPVIQKPWRGAAVFISKVPVTTKKENAEPKQRRAKSKRERDATAALRVDTPVEMFNSQSS
LPKDPILPKDPILRKQQLEDLMTKIRGSFSFMQDSLLDGEGSPTNGHPRLGRHASGSPSP
LVQRESRRSPVDHLPKTLHSTPLPSKHLPVDDEPNLTNGDGGSLESCDLDLTTEVLAHVI
AIDPCLLLSESETACPSPPAPPPFYRRESSISITLDEKTSARTPISESGKQSPCNGVVPP
CTPTPTQGQPFSTPPSRRTLSMAPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYLDSGND
LCYVTTSTQTPPDFAPLEDEHLQSVNQSECLVGSGGQIFLSPSQSGGTMGRSDQSYYRGS
VRGIARGGKGLAHSYFRSSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSG
WSDSSQVSSPDREGNYSLVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQP
LRVAFTAARTANYTPGTLDQPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLA
VNVPLYVNLMRNDEVMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWK
YSTFSGFLLYQD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgtcggcgacactaaatgcgcacacattggcgaggatttgaacatggtgcag
ctgtctccatccccagcccgggatgcgtctccttcacctgagtgctccgagaaggggagg
caggggagcccgaaggcaggtagccccaagatgggctcccatggtgggctgagtcctctc
cagctagctctgggagcctccaccaccatctaccagggctacgagagttacatcgaggac
ggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaa
gactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagatagatgcagtg
gagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagaccctg
gggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaaggagcagatg
gccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaagttcctcctg
cagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccag
ctccaggttgcagagctacaaagcctgcttgagctcgctgaactactgggggtgaagagg
gacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctacctggacctg
ctggaggggaaaaataaagccgtagccggaaccacctacaaggtcctgaaggctaagttg
gcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaagagtccc
aagaaagtagaggttcccatgacaaagaagacggtgtctgaaacagccagcctctctact
ctaatgacgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctg
cctgacacagaccccaatgggtgtcgagacactcccgttactcagaactggaaggctgag
ttccaggccatgaaggaacaggagccaccggactcgtgggatattgagtctgactccact
cagcctgtaatccagaaaccatggaggggggcggctgtgttcatatccaaagtgccggtt
actaccaagaaagaaaatgctgaacccaaacagagaagagcgaagtctaaaagggagcgg
gacgccacagctgcacttcgtgtggacacccctgtggagatgttcaactcccagtcttcc
ttgcccaaggaccccatcctgcccaaggaccccatcctgcgcaagcagcagctggaggac
ctgatgaccaagatcagaggctccttcagcttcatgcaggattctcttctggatggagaa
ggatcgcccactaacggccatcctagactgggccggcatgcctctggatccccctctcca
ctcgtacaaagagagtcaaggagaagcccagtggaccatctccccaaaacactgcattcc
actccattgccttctaaacacctccctgttgatgacgaacccaatctgaccaatggagac
gggggtagcctagagagctgtgacctggacctgactacagaggtcctggctcacgtcata
gccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctctcctccagct
cctcctcccttctaccgtagggagtcctccatctccatcacactggacgagaagacctct
gctcggactcccatctctgaatctgggaagcaatccccctgtaacggggtggtgcctcct
tgtaccccaacccccacccaggggcagccattttctacccctcccagcagacgtacactc
agcatggccccctctgttcccttccagaccatgcattcggtattcaaggtgaatgccccc
ttacttccgactggagactttaaatctgatattatcccctatttggactccggcaacgac
ctgtgctatgtcaccaccagcacccagaccccaccggattttgctcccctggaggacgaa
cacctacagtcggtgaaccagtctgaatgtctggtgggtagtggtgggcagatcttcctg
tcccctagccaatcaggtggcaccatgggccgttctgaccaatcatactacagaggatct
gttagaggtattgcacgtggtggcaaggggctggcacactcctactttcgctcttctggt
gggcacagaggaggaagcttcatcccccaggctcacctgtatggcgctcgggacactggc
taccagcacagctacaggcgtggtggaggcaatgcaggacaaaggcacaataatagtggt
tggagtgactcctcccaggtgagcagcccagaccgggagggcaactactctctggtggac
tccgcccacggcgactcgctgcagggtgttggcatggacctcaccccccaggtgacccct
catgccccccacaccctgatgcacgtacccatgtacccgctcccccagcatccccagccc
ctccgcgtggccttcacagcagcccgcacagccaactacaccccgggaaccctggaccag
cccatcacctttgaccagctccacagcaacctgggggaaatgttcaacaccaacgtgggt
cgtttcatctgcccagccaacggcacctacgtcttcctcttccacatcctcaagctggcg
gtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatggtgtctgcgtac
gccaacgacggggctccggaccacgagacggccagcaaccactccatcctgcagctgtac
cagggagaccaggtgtggctgcggctgcaccgcggctccatctatggcagcagctggaag
tacagcacattctctggcttcctgctctaccaggactga
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