Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393044
Help
Entry
139393044 CDS
T10872
Name
(RefSeq) high mobility group-T protein-like isoform X1
KO
K10802
high mobility group protein B1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03410
Base excision repair
ocla04140
Autophagy - animal
ocla04217
Necroptosis
Brite
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
139393044
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139393044
MMR (mismatch excision repair)
Other MMR factors
139393044
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
139393044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139393044
NCBI-ProteinID:
XP_070997471
LinkDB
All DBs
Position
33:complement(2278451..2289681)
Genome browser
AA seq
207 aa
AA seq
DB search
MSGCPLFSRPTQVTMGKDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSE
RWKPMSPKEKGTFEDMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCA
DFRAKIKSEHPGLSIGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGR
VDTASSAAADDDDDEDDEEDDDEDDDE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatgtccgttgttttcaagacctacacaagtcaccatggggaaagatcctagg
aagccgagaggcaagatgtcctcatatgcttacttcgtgcagacctgcagggcggagcac
aagaagaaacagcccgaagccagcgtcaacttcgccgagttctccaagaaatgctcagag
cgatggaagcccatgtctcctaaagaaaaaggaacgtttgaggacatggcaaagcaagac
aaggtccgctacgagagagaaatgaagaactacatcccacccaatggccagaaaaagaag
aggtttaaggatcccaatgcccccaagagaccgccgtctgcgttcttcatcttctgtgct
gacttccgggccaagataaagagcgagcacccaggcctgtccattggagacactgctaag
aagctgggagtgatgtggaacagctctgcagctgaggagaagaagccgtacgagaagaag
gcagccacgctgaaggagaaatacgacaaggatattgcatcataccgcaccaatggtaga
gtggatactgcctcctccgcagctgctgatgacgacgacgacgaagatgatgaggaggat
gacgatgaggatgatgacgagtag
DBGET
integrated database retrieval system
