Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393062
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Entry
139393062 CDS
T10872
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1-like
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139393062
04082 Neuroactive ligand signaling
139393062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ocla04030
]
139393062
G protein-coupled receptors [BR:
ocla04030
]
Metabotropic glutamate receptor family
GABA
139393062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
DUF6377
NEMP
DUF3995
Pox_P21
Motif
Other DBs
NCBI-GeneID:
139393062
NCBI-ProteinID:
XP_070997505
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All DBs
Position
3:complement(31048560..31096517)
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AA seq
998 aa
AA seq
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MAQLLFLIILYALPSLVVAMHNSTTGGCAIIRPPRDGGIRYRGLTQEQIRNVQILPVDYE
IEYICRGNRVIVGPKVRKCLPNGTWTDITLHSRCLLLCPRVWTSLENGRVALKPPGPPVE
GTMLHYSCHAGFMLEGRNITHCTKLGKWDSPKPVCLYDRNYKGKKKLYIGALFPMSGGWP
GGQACLPSAQMALDLVNNRTDILPDYELELIYYDSMCDPGESTKLLYDLLYTEPIKTVLM
PGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRNRFPTFFRTHPSATLHNPTRVRLFQK
WKWTKIATIQQTTEVFTSTLDDLEQRVKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIV
GLFYETEARKVFCEVFKEKLYGKKYVWFLIGWYADNWFKIKDPSINCTIENMTEAVEGHV
TTEIVMLNPETVRGASNLTSQEFLGALMNRLGGKNPEETGGFQEAPLAYDAVWALALALN
KTVAPLKAKGRRLEDFNYNNHDITAEIYRALNTSSFEGVSGHVVFDAQGSRMAMTLIEQL
QGGSYKKIGYYDSSQKNLSWFGNDVWIGAGPPADSTIVIEEFRYLSQKLFAAVSVFAGLG
ILLGIVCLTFNIYNSNVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGHHIHRSQFPVV
CQFRLWLLGLGFSLAYGSMFTKIWWVHNLFTKKEEKKEKRKHLEPWKLYATVGVLLAIDV
LSLMIWQIVDPLHITVEKFTREAPKGDLDVLIQPLLEHCTSEKMNTWLGVVYGYKGLLLL
LGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCMITAPVTMILTSQQDASFAFAALAIV
FSVYITLVVLFVPKMRRLITRGEWQSEQQDTLKTGSSTNNNDEEKSRQLERENRELQKII
QEKEQRVSELRNQLVERQALRNRRRPSSGTNQNHSNSSPPSSQPDPKSLLPPPGYPNPAS
DNHSSLPPSFSNSSNLYQADSKISHNHCHNSQIPLLYK
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctattgtttcttataattctgtatgctctgccatctcttgttgtggccatg
cataattcaacaactggaggctgtgccatcatccgtcctcccagagatggaggcatccgc
tacagaggcctgacacaagaacagattcgcaatgtgcagatcctaccagtggactatgag
atagagtacatctgcagggggaacagggtcatagtgggccctaaggtcaggaagtgcctt
cccaacggcacatggaccgacatcacactgcacagcagatgtttgctgctgtgccctcgt
gtgtggacgtccctggagaatgggagggtggcgctgaagccccctgggccaccggtggag
ggcaccatgctgcactacagctgccatgctggcttcatgctggagggcaggaacatcaca
cactgcaccaagctgggcaaatgggactcacccaaacctgtctgcctctatgacagaaac
tacaaaggcaagaagaaactctacatcggagctctcttccccatgagcggcggttggccg
ggcggccaagcatgtctcccctctgcgcagatggctttggatctggtgaacaaccggacg
gatattctgccggattacgaactggagttgatatactatgacagtatgtgtgacccgggt
gagtccaccaagttgctctatgatctgctctacacagagcccatcaagactgtcctgatg
cccggctgcagctccgtatccacactggtagcagaggctgctcgcatgtggaacctcata
gtgttgtcctatggctccagctctccagccttgtccaacaggaaccgtttccccaccttc
ttccgcacccacccctcggccaccctccacaaccccaccagggtacgcctcttccagaag
tggaagtggacaaagatcgctaccatccagcagaccacagaggtcttcacttcgactctg
gatgatctggagcagagggtgaaggaggctgggattgagatcagtgtgagacagagcttc
ctcaccgacccggctgtcgctgtcaagaacctcaagcgtcaagatgccagaataattgtg
gggctcttctatgagacggaagccaggaaagtattttgcgaggtatttaaggagaaactg
tatgggaagaaatatgtctggtttctgattggctggtatgctgataactggttcaagatc
aaagacccgtccatcaactgcaccatcgagaacatgacagaggcggtggagggccacgtt
accacggagatcgtcatgctcaaccccgagaccgtccgcggagcctctaacctgacctct
caggagttcctgggggcgttgatgaaccggctggggggtaagaacccggaagagacgggg
ggcttccaggaggcccctctggcctacgacgctgtctgggccctggccctggccctcaac
aagactgtggcccctctgaaggccaaaggtcgcaggctggaagacttcaactataacaac
catgacatcacagcagagatctaccgcgccctcaacaccagctcatttgaaggcgtgtct
ggtcatgtggtgtttgatgcccagggttccaggatggcgatgacccttattgagcaactg
caaggaggcagttacaagaagattggatactacgacagctctcagaagaatctctcctgg
ttcggcaacgatgtgtggataggtgccgggcccccggctgactcgacaatagtcattgag
gagtttaggtacctctctcagaagctgtttgctgccgtgtctgtcttcgctggtctgggc
atcctgctgggcatcgtctgtctgaccttcaacatctacaacagcaacgtgcggtacatc
cagaactcccagccctacctgaacaacatgacggcagtgggttgtatgatggccctggct
gctgtgtttcccctggggatcgacggacaccacatccacaggtcccagttccctgtggtc
tgtcagttccgtctgtggctgctcggcctgggcttcagtctggcctatggcagcatgttc
accaagatttggtgggtacacaatctcttcacaaagaaggaggagaagaaggagaagagg
aagcacctggagccatggaaactctatgcaacagttggagtgctactagccatagacgtc
ctgtcactcatgatttggcagattgtggatccattacacatcacagtagagaagttcact
agggaggcccctaaaggagacttggatgtcctgattcagcccctcctggagcactgcact
tcagagaagatgaacacatggctcggtgtagtgtatggctacaagggactgctgctgttg
ctggggatatttctggcctacgagaccaagtctgtttccacggagaagatcaatgaccac
cgagccgtggggatggctatttacaacgtggctgtgttgtgcatgatcacggctcccgtc
actatgatcctcacatcacagcaggacgcttcctttgcctttgccgcgttggccatagtg
ttctctgtctacatcaccctggtggtgctctttgtgcccaagatgcgcaggctgattaca
cgtggtgagtggcagtcagagcagcaggacacgctgaagaccggctcgtccaccaacaac
aacgatgaggagaagtctcgccagctggagagagagaaccgtgaacttcagaagatcata
caggagaaagagcagagggtatcggagctccgcaaccagctggttgagagacaggccctg
cgcaaccgacgacggccctcatccggcaccaaccagaaccacagcaactcgtccccgccc
tcttcccagccagaccccaagtctctcctgcccccacccggttaccccaaccctgcgtcg
gacaatcactcctccttacccccctccttctccaactcctccaacctgtaccaggcggac
agcaagataagtcacaaccactgtcacaacagccagatccccctgctctacaagtga
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