Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393107
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Entry
139393107 CDS
T10872
Name
(RefSeq) receptor-type tyrosine-protein phosphatase zeta-like isoform X1
KO
K08114
receptor-type tyrosine-protein phosphatase zeta [EC:
3.1.3.48
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139393107
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139393107
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ocla00535
]
139393107
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
139393107
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
139393107
Proteoglycans [BR:
ocla00535
]
Cell surface proteoglycans
Others
139393107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
fn3
PTP-SAK
Tc-R-P
DSPc
PTP-NADK
Y_phosphatase3
GUN4_N
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
139393107
NCBI-ProteinID:
XP_070997562
LinkDB
All DBs
Position
33:11358678..11415067
Genome browser
AA seq
1431 aa
AA seq
DB search
MELTVSRVLISIAQLLVFCQIVALTEAYFKAQRKFTDDIDWSYTGQLNQKIWGKRYPACN
NARQSPIDIDETFTQVRVEYQGLQLEGWEKNTPETTTINNDGNTVVLGLDGEYYVSGGGL
STRFRLGRMTFHWGRCNASSDGSEHSLNGLKFPLEVQIFCYESDLYQSIDDAVKDGGRIA
ALAVLFETSLDNNDNYNTIIEGVNSVSRFGKTENVEPFSLLALLPNSTDKYYMYNGSLTS
PPCSETVEWIVFKHTVPISETQLEVFCEVMTMQQAGYVMLMDYLQNNFREQQQQFLGQVF
SSYTGTEEVLTPMCSSAPQNMQADAQNDTTIMVMWERPRVVYDTTIDWYSVTYQRLQDQN
QPKHEYRTDGDQDVGAIIPGLLSNSSYVVQVVAVCTNGLTGRWSDQIIVDMPQEDPEIES
DPGNTEPEDILEPVDILEQVDQNPVEESRTREDRQQIFPEQPSTTAASQVSSVPVPPGTR
DDQNRIDQNPVNQSRMDKPKKDQTRKDKKKQRIPPHRPFTSAASNGKSATWVTMVTDQPG
FLIPVSRTTSPPPVRRQITEEASLSWSPQQIRNQNRGSAAQKPDVSGIGLLPPESDMYTP
PAGGMVVTDVYYEDVVNTTALEFTTTPSKTTLNKTLDDRVLSPVTARPKVTMKGEDLVLT
SRRSDNRVSTVTRATPIQQTPVSVTSTPSVPWIRPRTSSPSNSLSPAYGTSTTSGLVKVL
QLTTQPIFTEISNSSHESRVEMVGSVAEREKRTVVPLAVVSTLTIICLLVLVGILIYWRN
CFQTVDFFTEDTASPKVISALSSPLLPATEEHEALSVKQFVKHVAELHQTNTFSKDFEIV
TECYEEVQSCTVEMGITTDSSNHPDNKNKNRYINIMAYDHSRVKLLEEGEGGDYINANFV
DGFERTRAYIAAQGPLKSGTEDFWRMVWQENVGVIVMITNLLEKGRRKCDQYWPMENQEE
YGYFLVTLKDTKTLAYYTRRTFTVRDTSQKASQRGRCAERTVVQYHYTQWPDMGVPEYTL
PVISFVRASSQARTQDMGPVLVHCSAGVGRTGTYIVLDSMLQQIQDQGTVNILGFLKHVR
TQRNYLVQTKEQYVFIHDALVEAIISRDTLVTSDLVHSYVTDLLTTGPSGRTRMERQFKL
VSQRRARQADYAAALREGNADKNRTSSLMPVERSRVCLSCPVEGESSDYINASYIMGYHK
SREFILTQSPLPSTVSDFWRMVWDHNSQLIISLPDTHTAQSEGEESCVYWPSKDQPISCE
GFIVSFTGEDHMCLANEERLVVHDFLLEATQDNYVLEVRQYMSPCWPNPDSPVSSTFQLL
NIITEDSRRREGTIVVHDRLGGSMAGQFCALTTLAQQLEQQGSVDVYQVARMTNLMRPGV
FNDMEQYQFMYRAVLSLVDSQEDQRALQSPETNGSVPLGATTAAESLESLM
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggaactgactgtatccagagtgctgatttccattgcgcagctcctggttttctgccag
atagtggccttgacagaggcgtacttcaaggcccagagaaaattcacagacgacatcgac
tggtcctacacaggccagttgaaccagaagatctggggtaagaggtacccggcgtgcaac
aatgcccgtcagtcacccatcgacatcgatgagacgttcacccaggtccgggtggagtac
cagggcctgcagctggagggctgggagaagaacaccccagagaccaccaccatcaacaac
gacggcaacacggtggtgctaggcctggacggggagtactatgtgagtggcggtggtctg
agcaccaggttcaggttggggaggatgacgttccactggggacgctgcaacgcctcctca
gacggatcagaacacagcctcaacggactcaagttccccctggaggtgcagatcttctgt
tatgagtcagacctgtaccagtctatagacgacgcggtgaaagatggagggaggatcgca
gcgctggccgtcctgtttgagaccagcctggataacaatgacaactacaacaccatcata
gaaggcgtcaacagcgtcagcaggtttggtaagactgagaatgttgagcccttctccctg
ctggccctgcttcctaactctactgataaatactacatgtacaacggttccctcacctcc
ccgccctgctctgagacggtggagtggatcgtcttcaaacacaccgtgcccatctctgag
acacagttggaggtgttctgtgaggtaatgaccatgcagcaggcaggctatgtgatgctg
atggactacctgcagaacaacttcagggagcagcagcagcagttcttgggccaggtcttc
tcctcctacactggaacagaggaggtcctcactcccatgtgcagctcggcgcctcagaac
atgcaggcggatgcccagaacgacactaccatcatggtgatgtgggagcgcccccgtgtg
gtgtatgacaccaccatcgactggtactctgtcacctaccagcggctgcaggaccagaac
cagcccaaacacgagtaccgcaccgacggagaccaggacgtgggggccatcatccccggt
ctcctgtccaacagcagctatgtggtccaggtggtagctgtctgcaccaatggcctgacg
ggacgctggagtgaccagattatagtggacatgcctcaggaggacccggagattgagtct
gatccaggcaatacagaacctgaggatatattggaaccagtggatatattggaacaagta
gaccagaacccagtagaagagagcagaaccagagaggatcgccagcagattttccctgaa
cagccctccaccactgctgcctcccaagtgagctctgtgcctgtaccaccagggaccaga
gatgaccagaaccggatcgaccagaaccctgtgaaccagtccaggatggacaagcccaag
aaggaccagaccaggaaggacaagaagaagcagcgtatccctccccaccgccccttcacc
agcgccgcctccaacggcaagagcgccacctgggtcaccatggtgaccgaccagccgggc
tttctgatacccgtctcccggacgaccagcccgcctcctgtccgccggcaaatcacagag
gaggcctcattatcgtggtcgcctcagcagatccggaaccaaaatcgtggttctgctgcc
cagaaacctgacgtttccggtatcggcctgctacccccagagagcgatatgtacacccct
ccggcggggggcatggtggtcactgatgtttactacgaggacgttgtcaacaccactgcc
ttagagttcacgactacgccatctaaaacaacactgaacaaaaccctggatgatagagtt
ctcagtcctgttactgccagacctaaagtcacaatgaaaggagaggacttggttttgacc
tccaggcggtctgataacagagttagcacagtgacaagggccacccctattcaacagacc
ccggtttctgtaacctcaactccctctgtgccctggatcagacccaggacttcaagtccc
agcaactccctctcaccggcctacggcacctccactacctcaggcctcgtcaaggtctta
cagctcaccacccagcccatattcaccgagatcagtaacagcagccatgagtcaagggta
gaaatggtgggaagtgttgctgagagggagaagaggacagtggtccctctggctgtggta
tccaccctcaccattatctgtctcctggtcctggtgggcatcctcatctactggagaaac
tgcttccagacggttgacttcttcaccgaagacaccgcctcacccaaagtcatctctgct
ttgtcttcacctctgctgcccgccacagaagagcacgaggcgctgtccgtgaagcagttt
gtgaagcacgtggcagagctccaccagaccaacaccttctccaaggattttgagattgtg
acagagtgttatgaggaggtgcagtcgtgcacggtggagatgggcatcactactgacagc
tccaaccacccagacaacaagaacaagaaccgatacatcaacatcatggcctatgaccac
agcagagtcaaactgctggaagagggagaaggtggagactacatcaatgctaactttgtt
gatggttttgagcgtacaagggcctacatcgcagcccagggccccctgaagtctggaaca
gaggacttctggaggatggtgtggcaggagaatgttggagtcatcgtcatgatcaccaac
ctgttggagaagggccggaggaagtgtgaccagtactggccaatggagaaccaggaggag
tacggttatttcctggtgaccctaaaagacaccaagaccctggcctactatacccggaga
acctttaccgtcagagacacctcacaaaaggcttcccagaggggtcgctgtgctgagagg
acggtggttcagtaccactacacccagtggcctgacatgggcgtgcctgaatacaccctg
cctgtcatctccttcgtacgggcctcgtcccaggccaggactcaggacatgggccctgtc
cttgtacactgcagtgctggtgtggggaggacagggacctacatcgtgttggacagtatg
ctgcaacagatccaggaccagggaacggtcaacatactgggcttcctcaaacacgtcaga
acacagaggaactacctggtacagacgaaggagcagtatgtgtttatccacgatgccctg
gtggaggccatcatcagcagggacactctggtgacctctgacctggtccactcctacgtc
acggacctgctgaccactgggccctccgggaggacccgcatggagagacagtttaagctg
gtgagtcagcgcagagccagacaggctgactacgccgctgccctgagagagggaaacgct
gacaaaaacaggacctcctctctcatgccggtggagagatccagagtgtgtctgtcatgt
ccagtggaaggagaatcttcagactacatcaacgcttcctatatcatgggttaccacaag
agcagggagtttatcctgacccagtctcctctcccctccactgtctcggacttctggaga
atggtctgggaccacaactcacagctcatcatctccctgcctgacacacacacagcacag
agtgagggggaggagtcttgtgtttactggcccagtaaggatcagccaatcagctgtgag
ggtttcatagtgtcgttcactggagaggaccacatgtgtctggccaacgaggagagactg
gtggtccacgacttcttactggaggccacacaggataactatgtcctggaggtgcgtcag
tacatgtccccctgctggcccaacccagacagccccgtcagcagcaccttccagctgctc
aacattatcacagaggatagcagacggagagaaggaaccatagtcgtgcatgaccggctg
ggtggctcgatggcggggcagttctgtgccctcaccaccctggcacagcagctggagcag
cagggctctgtggacgtgtaccaggtggcacggatgactaacctcatgaggcccggtgtc
ttcaatgacatggagcagtaccagttcatgtacagggccgtgttgagtctggtggacagc
caggaagaccagagggccctacagtcccctgagaccaacggttctgtccctctgggggcc
accactgcagcagagagcctggagtccctcatgtaa
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