Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393110
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Entry
139393110 CDS
T10872
Name
(RefSeq) transcription factor GATA-3-like isoform X1
KO
K17895
GATA-binding protein 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139393110
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
139393110
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Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
139393110
NCBI-ProteinID:
XP_070997566
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Position
33:15790794..15808868
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AA seq
441 aa
AA seq
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MEVSADQPRWMSHHHPSVLNEQHPGSHHPGLGHSYMDPSQYPLADDVDVLFNIDSQGNHV
SPYYGNSVRAVQRYPPPPHSSQVCRPSLLHGSLPWLDGSKAMQHHSTSPWNLSPFQKSSL
HHGSPAGLSVYPSASSSSLSGGHSSPHLFTFPPTPPKDVSPDPGISTPGSSSNSRQQEEK
ECIKYQVSLAESMKLESHSRSMASIGAQSSAHHHHPIATYPSYVPEYGPGLFPPSSLIGG
SSSSYGSKTRPKTRSCSEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI
KPKRRLSAARRAGTSCANCQTSTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGI
QTRNRKMSSKSKKSKKSHDSMDDFSKSLMEKSSSFSPAALSRHMSSFPPFSHSGHMLSTP
TPMHPSSFAPHPHSSMVSAMG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaagtatccgcggaccaaccccgatggatgagccatcaccacccatcggtgctaaac
gaacagcatccaggctcgcaccacccgggcctcggccactcgtacatggacccctcgcag
tatccccttgccgacgatgtggatgtactgtttaatatcgactcacagggcaaccacgta
tccccatactatgggaactcagtcagagccgtccagaggtatccacctcctccacatagt
agtcaggtgtgtcgcccctctctactgcacggctctctgccgtggctggacggaagcaaa
gcgatgcagcaccacagcacttccccgtggaacctgagtcctttccagaagagctcactg
caccacggttccccggcaggtctctctgtctacccttcggcgtcctcctcctccctgtcc
gggggccactccagcccgcacctcttcacctttccccccactcctccgaaagacgtgtcc
ccggacccaggcatctccactccgggctcaagcagcaacagtcgccaacaggaggagaaa
gagtgcataaagtaccaggtgtccctggccgagagcatgaaactggagtctcacagccgg
agcatggcatcaatcggagcgcaatcctccgcccaccatcatcaccccatcgccacatac
ccatcctatgtccccgaatacggcccaggcctcttcccaccaagtagcctgataggtggg
tcatcttctagttatggttccaaaacaagaccaaaaacaaggtcatgttcagaaggtaga
gagtgcgttaactgtggagctacgtcgaccccgctctggaggcgggatggcactggtcac
tatttgtgtaacgcctgcggactctatcacaagatgaacgggcagaatcggcccctcatc
aaacccaagcgacgactgtctgcagcaagacgcgcaggaacatcatgtgcaaactgtcaa
acgagcacgacaacactgtggcgaagaaacgccaacggggaccccgtgtgtaacgcttgc
ggtctatactacaaactgcacaatatcaaccgacctctcaccatgaagaaggagggcatt
cagaccaggaacaggaagatgtccagcaagtcgaagaagagcaaaaagtcccacgacagc
atggacgacttctccaagagcctgatggagaagagcagctcgttcagccccgccgctctg
tcccgccacatgtcctccttcccccccttctcacactccggacacatgctgtccaccccc
acgcccatgcacccctcctccttcgcccctcacccccactccagtatggtctctgccatg
ggctag
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