Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393127
Help
Entry
139393127 CDS
T10872
Name
(RefSeq) zinc finger protein 423 isoform X1
KO
K22870
zinc finger protein 423
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139393127
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139393127
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139393127
Cilium and associated proteins [BR:
ocla03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
139393127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-Di19
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_FBX41
Zf-C2H2_ZNF451_C
zf-C2H2_3rep
Zap1_zf1
zf-met
zf-C2H2_ZNF462
zf-C2HE
zf-C2H2_2
DUF8108
zf-C2H2_9
Zn_SUZ12
zf-C2H2_OTU1_C
Motif
Other DBs
NCBI-GeneID:
139393127
NCBI-ProteinID:
XP_070997636
LinkDB
All DBs
Position
1:25553449..25707023
Genome browser
AA seq
1380 aa
AA seq
DB search
MSRRKQAKPRSVKAVEEGESSEFAGNWDSSSAQTDVPAVADREAERKERRAALEDGDHSV
TSHDDRIGDDDLDDESIFTCDNCQQDFECLAELTDHRTNHCPADGDDDPGLSWVASSPSS
KDVASPSQMLGDGCCDLGMGTGEEEGGAGLPYPCQFCDKSFSRLSYLKRHEQIHSDKLPF
KCTFCSRLFKHKRSRDRHVKLHTGDKKYSCQECEAAFSRSDHLKIHLKTHSSSKPFKCSV
CKRGFSSTSSLQSHMQAHRKNKEHLALRAEKEGGKRGSNAGSGGEMDQDPYMCDYCEETF
SQTDELEKHVVTRHPQLSDRVDLQCIHCPEIFSDEGPLLSHIERSHANRKHKCPVCLEQF
PSVEDVYCHLDSHRQPDSSNHSASPDPVLGSVASMSSATPDSSASLERGSTPDSTLKPTQ
SRRKLAPNSDHDDGGHWMAKVTYSCPYCSKRDFNSLAVLEIHLKTIHADKPQQNHTCQLC
LDTLPTLYNLNEHVRKAHRSSGGASAAFPLLQFTNVSAFHCNYCPDMFADINTLQDHIRM
SHCLPGGMVAGSTTLEGNHAFFCNQCSMGFLTESSLTEHIQQTHCSGGGVPKMESPVLQP
SQSFMEVYSCPYCTNSPIFGSLLKLTKHIKENHKNIPLANNKRQAKVADLSPASSDVEIS
SPKRHRLAGDSTLAGSNGDYPCNQCDLHFSSFESFQAHLKSHLEMLLRRQSCPQCNKEDF
DSQESLLQHLTVHYTTTSTQYVCESCDKQFSSVDDLQKHLLDMHTFVLYHCTLCQEVFDS
KVSIQVHLAVKHSNEKKMFRCTACAWDFRKESDLQLHVKHSHLGHPTGPAVAGKARKCIF
CGETFGTEVELQCHITTHSKKFNCRFCGKAFHAIVLLERHLREKHCVFDGGNGTGNGGSQ
NGTPNGVTQSSKRGGGGERSTVTTEQADLQSMLLKNASQDVANSHEASGGEEELDNSEPM
YACDICGAAYTMESLLQNHRLRDHNIQPGDDDAGTRKKKADFIKGNHKCNVCSRTFFSEN
GLREHAQTHRGPAKHYMCPICGERFPSLLTLTEHKVTHSKSLDTGTCRICKMPLQSEEDF
IEHCQMHPDLRNSLTGFRCVVCMQTVTSTLELKIHGTFHMQKLSSGGGSGCGGGSASSSP
NGQLQQHKHYKCALCLKEFKNKQELVKLDVNGLPYGLCAGCMSRATNGQSPSGGTTPQEA
GGEKVAPVLRCPECAVKFETLEDLESHVQVDHPEMSPETSGAKKVTDASPVPKKKTYQCI
KCQMTFETEREIQIHVANHMIGEPAQLQEEGINHECKLCNQMFDSPAKLLCHLIEHSFEG
MGGTFKCPVCFTAFVQANKLQQHIFAVHGQEDKIYDCSQCPQKFFFQTELQNHTLSQHAQ
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgaaaacaggctaaaccgcgttccgtaaaagcggtggaagaaggcgagtcg
tcagagtttgcagggaactgggattcatcgtccgcccaaacagatgtccctgctgtagca
gaccgagaggcggagaggaaggagcggcgtgcagccctggaggacggcgaccatagtgtc
accagccatgacgatcgcattggggacgatgacctggacgatgagtccatcttcacctgc
gataactgccagcaggactttgagtgtctggccgagctgactgaccaccgcaccaaccac
tgccccgcagatggtgatgatgaccctgggctctcctgggtagcgtcctctccctccagc
aaagacgtggcatcgccgtcacagatgctaggggatggctgctgtgatctgggcatgggc
acaggggaggaagaagggggcgcggggctgccctacccctgccagttctgcgacaagtcc
ttcagccgcctcagctacctgaagcgccacgagcagatccacagcgacaagctgcccttc
aagtgcaccttctgcagccgcctgttcaagcacaagcgcagccgcgaccgccacgtcaag
ctccacaccggagacaagaagtacagctgccaggaatgtgaggcggctttctcccgcagc
gaccatctcaagatccacctgaagacccacagctccagcaagccctttaagtgcagcgtg
tgcaagagaggcttctcctccacatcctctctacagagtcacatgcaagctcacaggaag
aacaaggagcaccttgccctgcgtgctgaaaaggaaggggggaagcgtggcagcaatgca
ggcagtggaggggagatggaccaggacccatacatgtgtgactactgtgaggagaccttc
agccagacagacgagctggagaagcacgtagtgacccgccacccccagctgtctgaccgc
gttgacctacagtgcatccactgccctgagatcttcagcgacgagggcccgctgctctcc
cacatcgaaaggtcccacgccaaccgtaaacacaagtgccctgtgtgcttggagcagttc
ccctctgtggaggacgtctattgccacctggacagccaccggcagcccgactccagtaac
cacagtgccagccctgacccagtgctgggcagcgtggcatccatgagcagcgccacccca
gactccagtgcctctctggagaggggttccacccctgactccaccctgaagcccacccag
agccgccgcaagctggcccccaactctgaccacgacgatgggggtcactggatggccaag
gtgacctacagctgcccctactgctccaagagagacttcaacagcctggccgtgctggag
atccatctgaagaccatccatgcagacaagccccagcagaaccacacctgccagctgtgt
ctggacaccctgcccacgctctacaacctcaacgagcacgtccgcaaagcccaccgaagc
agcgggggcgcctcagcggccttccccctgctccagttcaccaacgtctcggccttccac
tgcaactactgcccagacatgtttgcagacatcaacaccctgcaagaccacatccgcatg
tcccactgcctgcctggaggaatggttgcaggctccaccaccctggagggcaaccacgcc
ttcttctgcaaccagtgctccatgggtttcctcacagagtcctctctcacagagcacatc
cagcagacccactgcagcggaggaggggttcccaagatggagtcccccgttctgcagccc
tcccagtccttcatggaggtctactcctgtccatactgcaccaactcacccatctttggc
tccctgctcaagctcaccaagcacatcaaggagaaccacaagaacatcccactggccaat
aacaagcggcaagccaaggtggctgaccttagcccagcttcatctgatgttgaaatctcc
tcccccaaacgccataggctggctggggactctaccctggcagggtccaatggagactac
ccctgcaaccagtgtgacctacacttcagcagcttcgagagcttccaggcccatctcaag
tcccacctggagatgctgctgaggaggcagtcctgcccgcagtgcaacaaagaggacttt
gactcccaggagtctctgctgcagcacctgacagtccactacaccaccacgtccacacag
tacgtgtgtgagagttgtgataagcagttctcctctgtagacgacctgcagaagcacctg
ctggacatgcacacctttgtgctgtaccactgcacgctgtgccaggaggtgtttgactcc
aaggtgtccatccaggtccacctggctgtcaagcacagcaatgagaagaagatgttccgc
tgcacggcctgtgcctgggacttccggaaggagagtgacctccagctgcatgtcaagcac
agccacctgggacaccccactggccctgcggtcgccggcaaggcccgcaagtgcatattc
tgtggggagacgtttggcaccgaggtggaactgcagtgccacatcaccacccacagtaag
aagttcaactgccgcttttgtggcaaggcctttcacgctattgtgctgctggagaggcat
ctgagggagaagcactgtgtcttcgacggtggcaatggcactgggaatgggggcagccag
aatggtacacccaacggggtgacccagagctccaagcgtgggggaggaggcgaaagatcg
acagtgaccacggagcaggcagacctgcagagcatgctgctgaagaatgccagccaggac
gtagccaacagccatgaggccagcggaggagaggaggagctggacaactcagagcccatg
tacgcctgtgacatctgtggagcagcctacaccatggagagtcttctgcagaaccaccga
ctgagggaccataacatccagcccggggacgacgacgccggcacccgcaagaagaaggcc
gacttcatcaagggcaatcacaagtgcaacgtgtgctcacggacctttttttcagagaat
ggcctgagggagcacgcccagacccatcgtggcccagccaagcactacatgtgccccatc
tgtggagagcgcttcccctccctgctcacgctcaccgaacacaaggtcacccacagcaaa
agcctggacacgggcacctgccgcatctgtaagatgcccctgcagagcgaggaggacttc
atagagcactgccagatgcacccagacttgaggaactctctgacgggcttccgctgtgtg
gtatgcatgcagaccgtcacctccaccctggagctcaagatccacggcaccttccacatg
cagaagctctcgtccggtgggggcagtgggtgcgggggtggatcggcctcctcctccccc
aacggccagctgcagcaacacaagcactacaagtgtgccctgtgcctcaaggagttcaag
aacaagcaggagctggtgaagctggatgtgaacgggctgccctatgggctgtgtgctggc
tgtatgagccgggctaccaacggccagtctcccagcgggggcaccacgccccaggaggcc
gggggagagaaggttgcaccggtgctgcgatgccccgagtgtgctgtgaagtttgagacc
ctggaggacctggagagccacgttcaggtggaccaccccgagatgagcccggagaccagt
ggggccaagaaggtgacggatgcctcgcctgtccctaaaaagaagacgtaccagtgcatc
aaatgccaaatgaccttcgagacagaacgagagatccagatccacgtcgccaatcacatg
atcggagaacctgcccagctgcaagaggaaggcatcaatcacgagtgcaagctgtgtaac
cagatgtttgactctccggccaagctcctgtgtcacctgatcgagcatagcttcgagggc
atgggcggcaccttcaagtgtcccgtctgcttcacagcctttgtccaggccaataagctg
cagcagcacatctttgccgtccacggtcaggaggacaagatctacgactgctcccagtgt
ccacagaagttcttcttccagactgagctccagaaccacacactgagccagcacgcgcag
tga
DBGET
integrated database retrieval system
