Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393176
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Entry
139393176 CDS
T10872
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04510
Focal adhesion
ocla04512
ECM-receptor interaction
ocla04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139393176
04518 Integrin signaling
139393176
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139393176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocla04147
]
139393176
00536 Glycosaminoglycan binding proteins [BR:
ocla00536
]
139393176
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139393176
Glycosaminoglycan binding proteins [BR:
ocla00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139393176
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
139393176
NCBI-ProteinID:
XP_070997684
LinkDB
All DBs
Position
33:complement(3240120..3266321)
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AA seq
469 aa
AA seq
DB search
MKLSVVLLALALASAFAAEESCVGRCHSFNPMTKCQCDSMCRYYSSCCMDFDSACPRKIS
RGDTFDAPEDDVVNTPTTAVNTNSGTMVDPETTNIPPVMNTTAVPTTTLAPTTTTHTPTL
PPDPEAVPCSGKPFDAFLQLKNGSIYAFRGDYFFELDERAVVPGYPKLIYDKWGIRGPID
AAFTRINCQGKTYIFKGNKYWRFEDDVLDADYPRDISVGFEKVPTDVDAAFAIPAPGHHG
KEKVYFFKGDQYYQYEFKHQPSHEECVRLTKSSPSVLFTRYTDLYCDDTWENLFTMLFQG
LHGHKKGPRFINKDWVGIKSPIDAAMVGRLYISPKPTPSPSPTPRRRANRWRKDRRRGQR
GRARQSRSAYFEDFFLDDHDWMGGGFTYDSDYSDYNPTHTTHDKTLPVQNVYFFKKDKYY
RVDLQTKHIDFASPPYPRSIAKYWLGCKQESGPDREEIDRHYEPMAEKK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtcagttgttctgctggcactcgcgctggcctctgcgtttgctgcagaggag
tcgtgtgtgggtcgctgtcacagcttcaaccccatgaccaagtgccagtgtgactccatg
tgtcgctactacagcagctgctgcatggattttgacagtgcctgccctaggaagatttcc
cgcggtgacacatttgatgccccagaggacgatgtagtgaacacccccactacagcagtt
aacaccaactctgggaccatggttgacccagagaccacaaacattcctccagttatgaac
acaactgctgtccccaccaccaccctggccccgaccaccaccacccatacccccaccctc
ccccctgacccagaggcagtgccctgcagcgggaagcccttcgacgccttcctccagctc
aagaacggatccatctacgccttcagaggtgattatttctttgagctcgatgagagggcg
gttgtccccggttaccccaaactgatctacgacaagtggggcatcagaggacctatagat
gctgcctttactcgcatcaactgccagggcaagacctacatcttcaaaggaaataagtat
tggcgttttgaggacgatgttctggatgccgattaccctcgggacatctctgtagggttt
gagaaggttccaactgacgttgacgctgccttcgccataccagcacccggtcaccatggc
aaagagaaggtctacttcttcaaaggggaccagtactaccagtatgagtttaagcaccag
ccgtctcacgaagagtgtgtgcgcttgactaagtcgtccccctctgtgctcttcacgcgc
tacaccgacctgtactgtgatgatacctgggagaaccttttcacaatgcttttccaaggc
ttgcatggccacaaaaagggcccacggttcatcaataaagactgggtggggatcaagtcc
cccatagacgctgccatggtgggccgtctttacatcagccctaaacccactccctcccca
tcccccacccccaggagacgagccaataggtggaggaaggacaggaggcggggtcagaga
ggcagggccagacagagtcgctcagcgtactttgaggatttttttttagatgaccacgac
tggatgggaggaggcttcacatatgactctgactacagtgactacaaccccacacacact
acacacgacaagacactgcctgtacagaacgtctacttcttcaagaaagataaatactac
agggtggatctccagaccaaacacattgactttgccagccctccctacccacgatccatt
gccaagtactggctgggctgcaaacaggagtctggcccggacagagaagagatagacaga
cattacgagccaatggcagaaaagaaatga
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