Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393186
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Entry
139393186 CDS
T10872
Name
(RefSeq) liprin-beta-1-like
KO
K27096
liprin-beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139393186
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139393186
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PUMA_CC
DUF16
HR1
Motif
Other DBs
NCBI-GeneID:
139393186
NCBI-ProteinID:
XP_070997717
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All DBs
Position
33:complement(19399811..19432710)
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AA seq
888 aa
AA seq
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MMSDASEMLAAALEQMDGIIAGSKAMGYSNGLFDCQSPTSPFLGSLRALHLLEDLRAALE
MMDQDEREGLRCQVPDTTADGLVEWLQQGQLTNGNGSAMIYQERLSRVESDKECLVLQVS
VLSDQVEVQGEKIRDLDMCLEEHREKLDATEETLQQEFLTRSTLETQKLELMTEVSSLKL
KLTTVARDRRDSEGLYQEVNDLRFRVTDMENERLQCEKKLKSTKEELQTLQRQLEELRRL
RDQATQGVLTPDRTDGEKDVDVLRMKRAMDSLMSASNDKDRRIEELQESITRYKKVQDLM
KDTLNEDNYDDIQDDRSPSIQVAMDTDQATLAVGEETGRSCDEIPSIAVFSELEQESLIQ
EPDTDSPPEVPPHSAGSLGHINSNTEQTTVKVPSPPSNPSSNESFGNKKARSSFGRGFFK
MRGGKRTSSAPNLAETERNGTDHLDLAGAPPDKPQGGDSSQTLPSSPEAKKKSRGFMKFL
GRLKRSHSTSLDLEETEFRRGGVRATAGPRLGWSRDLQHSANDVDAPFAQWSKEQVCVWL
QEQGLGLHVAQAQQWIRSGFTLLQASQHDLEKELGIKQPLHRKKLQLALQALGSDEDVSK
AKLDHNWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAI
QVLRLNFYEPNCLRRRPSDENNITPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGG
VMVLEPRFNVESLALLLNIPPNKTLLRRHLATHFHLLIGSAAQRSKQECLENPDYTLLTA
TAKVKPRKLSFGGFGTLRKKRQEDSEEYVCPMDVEMPKNSSFQGGLRSYEDDLDQLEQME
DSEGAVRQIGAFSEEIDNLTSMLKEDEFFSEVSSRSPEASVTDDDSNM
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatgccagcgagatgttggcagccgccttagagcaaatggatgggatcata
gcaggctccaaggccatgggctactccaatgggctgtttgactgccagtcgcccacctct
cccttcctgggaagcctgcgggcgctgcacctgctggaggacctgcgggcggcgctggag
atgatggaccaggatgagcgggagggcctccgctgccaggtccctgacaccaccgccgac
ggcctagtggagtggctgcagcagggtcaattgaccaacggaaatggctccgccatgatc
taccaggaacgactgtcacgggtggagagcgataaggagtgtctcgttctccaggtgagt
gttctctcagaccaggtggaggtgcagggggagaagatcagggatctggacatgtgtctg
gaggagcacagagagaaactcgacgccactgaagaaacgctgcagcaggagttcttgacc
aggtccaccctggagacccagaagctggagctgatgaccgaggtgtctagtctgaaactg
aagctgaccactgtggcgagagatcgcagggatagtgaggggttgtaccaggaagtcaat
gacctgcggttcagggtgaccgatatggagaatgaaagactgcagtgtgagaagaaactt
aaatccaccaaagaggaactgcagactcttcagaggcagctggaggagctgaggaggcta
agagaccaggctacacagggagtgctgaccccagacagaacagatggagagaaagatgtg
gacgtgctgaggatgaagagggccatggattccctgatgtcagctagcaatgacaaggac
cggaggatcgaggagcttcaggagtctatcacacggtacaagaaggtccaggacttgatg
aaagacacactgaatgaagacaattatgatgacatccaggatgacagatccccctccatt
caggtcgccatggatacagaccaggccacactggcggttggggaggagacaggaaggagc
tgtgacgagattccatcaattgcagtgttttcagagctggagcaggagagcctgatacag
gaaccagacacagacagtccaccagaagtcccaccacattcagcaggtagcttgggccac
ataaacagcaacacagagcagaccacagttaaagtgcccagccccccatcaaaccccagc
agtaatgaaagctttgggaacaagaaggcccgctcctcctttggacgtggtttcttcaag
atgcgtggaggcaagaggacgtccagtgccccaaatctggctgagaccgagcgtaatggc
acagaccacttggacttggctggtgccccaccagacaaacctcagggaggagacagcagc
cagaccctaccttcctcaccagaggccaagaagaagtccagaggctttatgaagttctta
ggcaggctgaagagaagtcactccacttcgctagacctagaggagactgagttcaggagg
ggaggagtcagagccacggccggcccccgactgggctggtcacgtgacctgcagcacagc
gccaatgatgtggacgctccctttgcgcagtggagtaaggagcaggtgtgtgtgtggctg
caggagcagggcctggggctgcacgtggctcaagcccagcagtggatccgctcaggattc
accctgctgcaggcctcccagcacgacctggagaaggagttggggatcaaacagcccctc
cacaggaagaagctgcagctggctctccaggcactgggatcagatgaggatgtcagcaag
gccaaactggaccacaactgggtgaccagatggcttgatgacattggtctgccgcagtat
aagagccagtttgatgaggggagggtcgatgggcgaatgctacactacatgactgtggat
gacctgctgtctctaaaagtgggcagtgttctccaccacctcagcatcaagagagccatc
caggtcctccggctcaacttctacgagcccaactgcctccgccgacggccctctgacgag
aataacatcacgccagcagagatctcccagtggaccaatcacagagtgatggagtggctg
agatcagtggacctggctgagtacgctcctaacctgaggggcagcggtgtgcacgggggg
gtcatggtgctggagcctcgcttcaacgtggagtccctagccctcctgctcaacatccct
cccaacaagaccctgctgcgccgccacctggccacccacttccacctgctcatcggctcc
gctgcccagcgcagcaaacaggagtgtctggagaaccctgactacaccctgctcactgcc
accgccaaggtcaagcccagaaagctgtcgttcggtggctttgggaccctgcgtaagaag
cgccaggaggacagcgaggagtacgtgtgccccatggatgtggagatgcccaagaacagc
agcttccaggggggcctgaggagctacgaggatgacctggaccagttggagcagatggaa
gactcggaaggggctgtgaggcagataggagcattttctgaggaaatcgacaacctgacg
agcatgctgaaggaagatgagttcttcagcgaggtctcctctcgctcccccgaggccagt
gtcaccgatgacgactccaacatgtga
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