Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393211
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Entry
139393211 CDS
T10872
Name
(RefSeq) claudin-2 isoform X1
KO
K06087
claudin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03272
Virion - Hepatitis viruses
ocla04382
Cornified envelope formation
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
139393211
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139393211
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139393211
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139393211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139393211
04147 Exosome [BR:
ocla04147
]
139393211
Cilium and associated proteins [BR:
ocla03037
]
Other cilia and associated proteins
Stereociliary proteins
139393211
Exosome [BR:
ocla04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
139393211
Exosomal proteins of colorectal cancer cells
139393211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
139393211
NCBI-ProteinID:
XP_070997753
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All DBs
Position
33:4813232..4816238
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AA seq
284 aa
AA seq
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MLLSLAWPVHQLALVQPEPCTKGMLGTLVSTVLPYWRTSAHIGPNIVTAVANMKGLWMEC
VYQSTGAFQCETYNSMLALPSDLQASRALMVVSVVFSVLAVVISTVGMQCTICMEGSTAK
GRVAGTGGGLFLTAGFLALIPVSWTTHEVVQTFYQANLPNSLKYELGDCLYVGLAAALLS
MLGGGLLCVSCCEKADGGRRGGRRHGGGYPYPAPGMGVGTGRARTSSQTYRNPTLQMGVN
AATKAATLARSHTSTTTQSSTPAQGAKKDPRRNPAVGYDVTGYV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttagcctggcctgtccatcagctggccttggtgcagcctgaaccgtgt
accaaaggcatgctgggtaccctggtgtccacagtgcttccctactggcggacatctgcc
cacatcgggcccaacatcgtcactgccgtggccaatatgaagggcctctggatggagtgt
gtctaccagagcaccggagccttccagtgtgagacctacaactccatgctggccttaccc
tcagacctccaggcctcccgggccctgatggtggtctccgtggtcttttccgtcctggcc
gtcgtcatctccaccgtgggcatgcagtgtaccatctgcatggagggctcaacggctaaa
ggccgagtggccggtactgggggaggcctcttcctcaccgcggggttcctggctctgatc
ccggtgtcgtggaccacccacgaggttgtccagaccttctaccaagccaacctgcccaac
agcttgaagtacgagctgggggactgtctgtacgtggggctggccgccgccctgctctcc
atgctgggcggggggctgctatgtgtctcctgctgtgagaaggcggatggggggcgccgt
ggagggaggaggcacggcggagggtacccctacccagccccgggcatgggggtaggcact
gggagggccaggaccagctcacagacctataggaacccaacgctacagatgggggtgaac
gctgccaccaaggcagcgaccctggcaaggagtcacaccagcactactacccagtccagc
acccccgcccagggggccaagaaagacccacgccgcaaccctgcggtgggctacgatgtc
actgggtacgtctga
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