Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393226
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Entry
139393226 CDS
T10872
Name
(RefSeq) sialic acid-binding Ig-like lectin 8
KO
K06549
sialic acid binding Ig-like lectin 5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139393226
04091 Lectins [BR:
ocla04091
]
139393226
CD molecules [BR:
ocla04090
]
Proteins
139393226
Lectins [BR:
ocla04091
]
I-type lectins (Siglecs)
139393226
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
Ig_2
I-set
Ig_CD22
C1-set
C2-set_2
Ig_4
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
139393226
NCBI-ProteinID:
XP_070997780
LinkDB
All DBs
Position
3:31562530..31569128
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AA seq
591 aa
AA seq
DB search
MWVLILAALLFSLAERATCRKLAAQPTASSWTITFSPAEITAEKGLCAVISCTFSHPDNI
KPTAAVWFKCPTKGKCDKDKNIMFHSKKPSKAQECYKQRVSLLETDLTKKNCSVIINDIR
ENDAGEYQFRLPSSDTYPKKVNITVSALTQKPSVLTPALTEGEPATLTCTAPGMCSGTPP
NITWTWRGTGDNITELRDNITIQERENLTTVTTTHFSTLTFTPSAKHHGTNVTCLVTFNG
RITTKKTLTMNVAHVKEPKISGCNTVREGDTLNLTCSDDRYPPSSSNITWSKKGTTALER
NNSGRATLIISNMTREHAGEYVCTAQHHSRSLTASTVVTVMLISTISLPVRNHTNTTMEC
VSRNEAGRVREVQVTQIEKQEEDVSKDIMALLSDLQLITAFVVGASLSATIFCIFLCLKG
KRKRCKERIPKDSDSKSHFMNLEMVACEDQQMDAGQAVGGKQTPLQVELREGEENGGPQT
SGAVGKSTTGGEPNEVDYASINYSLLKKKTPEEAEKKTTTTETDYAEIKRQKKNEEEEDG
GEGSGVMEEVEWEEGEETVGKEEEKENSKPLRETDEDTALYSNVKAIMGGE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcattttggcagctctactcttctctctggcagagagagcaacatgtcga
aaactggcagcacaaccaacagcatcatcctggaccatcaccttcagtccagcagaaata
acagcagagaagggactatgtgctgttatttcatgtactttctctcaccctgataacatc
aagcctaccgctgcagtatggttcaagtgccctacaaagggcaaatgtgataaggataaa
aacataatgttccactccaaaaaaccctctaaagctcaggagtgttataaacagagagtg
tctctactggagactgatctgacaaagaagaactgtagtgtgatcatcaacgacatcaga
gagaatgatgctggagagtatcaattcagactgccaagttcagatacatacccaaagaaa
gtgaacatcacagtgagcgctctgacccagaagccctcagtgttgactcctgctctgaca
gagggagaaccagctactctgacctgcaccgccccggggatgtgctctggaactcctcct
aacatcacatggacatggagaggaacaggagacaacatcactgagctcagagacaacatc
accatacaggagagagagaacctgaccactgtgacgacaacccacttctcaacgttgacc
ttcaccccctcagctaagcatcacggcaccaacgtcacatgtctggtgacattcaatggc
cgcatcaccactaagaagacactgacaatgaatgtggcacatgtgaaggaacccaagatc
tctggttgtaacacagtgagagagggtgataccctgaatctgacctgcagtgatgacaga
tacccaccatcatcatctaacatcacctggagtaagaaggggacaacagctttggaacgg
aataactctggacgggccactctcatcatctctaacatgacaagagaacatgctggggag
tatgtgtgtacagctcaacaccacagtagatctctgacggcttccactgttgtcactgtg
atgttgatcagcaccatcagcctgcctgtcagaaaccacaccaataccactatggagtgt
gtcagcagaaatgaagcgggcagagtgagagaggtgcaagtcacccaaatagaaaaacaa
gaagaggatgtgtctaaagacatcatggctttgctgtcggacctacaactgattactgca
tttgtggttggtgcatccctctcagccaccatcttttgtatcttcctgtgtttgaaaggg
aaacgtaaaagatgcaaagagaggatcccaaaggactcagactccaaaagccatttcatg
aacctggagatggtggcatgtgaagaccaacagatggatgcaggacaggctgtggggggc
aaacagacccctctgcaggtggagctgagggagggagaagaaaacggagggccccagacc
agtggagccgtagggaaatctaccacagggggtgaaccaaatgaagtggactacgccagt
atcaactactccctgctgaagaagaagactcctgaggaggcagagaagaagaccaccacc
acagagacagactacgccgaaatcaaacgacagaagaagaatgaggaggaagaagatggt
ggagaggggagtggtgtgatggaagaggtggaatgggaggaaggggaggagacggtaggg
aaggaagaggagaaagagaacagtaagccattacgagagacagatgaggatacagccctt
tactccaacgtcaaggctattatgggtggagagtga
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