Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393232
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Entry
139393232 CDS
T10872
Name
(RefSeq) leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139393232
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
139393232
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Ig_3
I-set
LRR_9
ig
LRR_1
Ig_2
LRR_EndoS
fn3
LRR_Zer-1
LRRCT
Pur_ac_phosph_N
LRRNT
Motif
Other DBs
NCBI-GeneID:
139393232
NCBI-ProteinID:
XP_070997787
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All DBs
Position
33:10745461..10761310
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AA seq
706 aa
AA seq
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MKDVSFVDRFFVGLAMTAFVLASEERVDCPQLCVCEIRPWFSPSSVYMEAPIVDCNDLGL
FTLPGRLPMDTQVLLLQTNNIAKIEKPLDYLANITEIDLSQNNLSSMSDIHLGRLPQLLS
LHMEENWIRQLPDSCLAELANLQELYMNHNLISSISPTAFQGLHNLLRLHLNSNKLQTMS
SEWFDTMPNLEILMIGENPITSVQDMNFKPLRNLRSLVLTRMNLSQLPDGALSGLDNLES
ISFYDNTFPEVPHAALRNLKNLKFLDLNKNPIGRIQRGDFADMLHLKELGINSMPELVSI
DSFALNNLPELTKIEATNNPKLSYIHPNAFYKLPRLETLMLNGNALSALHRITVESLPNL
REVSMHSNPIRCDCVVRWMNMNKTNIRFMEPDSLFCVEPPEYEGQHVRQVHFREMTEICL
PLISPESMPGHVSVDNGSSVSLHCRAFAEPEPDIYWITPSGTRVLPNTVSDKYYMHPEGT
FDIYDVTENEAGLYTCVAHNLVGADLKSVSVEVDGYFPRPANGSLDVNIKSVQTNSVLVA
WKAAHGGLAPNIKWYTASDPNRPTMAFTARVPSDVKVYNLTHLTPATQYKVCVDIRGILY
KHDTKCVNVTTKGLELAAKDTEKWHAAVIAVFGVLLAVISVACLLIYVSLRNHHLCGDLK
KCRSKVSLTPVAGLHSPFTRLWVSGKGLPTAVEVKPTVINVSDNAF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgtgtcatttgtggatcgtttcttcgtgggccttgccatgactgcctttgtt
ctggcctctgaggagagagtcgattgccctcagctatgtgtgtgtgaaatcagaccctgg
ttctctcccagctccgtctacatggaggccccaattgttgactgtaatgacttgggactt
ttcactctgcctgggagattaccaatggacacacaagtgctattgctgcagaccaacaac
attgcaaagattgagaaacctttggattacctggccaacatcacagagattgacttgtcg
caaaacaacttatcttcaatgagtgacatccacctcgggcggctgcctcagctgctgtcc
ttacacatggaggagaactggatacgccagctcccagatagctgcctggcagagctggcc
aaccttcaggagctttacatgaaccacaacctgatctcatccatctcccccacagcgttc
cagggcctccacaatctcctccggctccacctcaactccaacaagctgcagacgatgagt
agtgagtggttcgacaccatgcccaatctggaaatactcatgattggggagaatccgata
acctccgttcaagacatgaacttcaagccccttcgtaatctcagaagtctagttctgacc
aggatgaacctatcgcagttacccgacggcgctctatctggcctcgacaacttggagagc
atctcgttctacgacaacacctttcccgaagttccccacgcagctctgcggaacttaaag
aacctcaagtttctggatcttaacaagaatcccatcgggaggatacagaggggagatttt
gcagacatgctccacctcaaagagctgggaattaacagcatgccggaactggtttctatc
gacagcttcgccctaaacaacctccccgaactgactaagatcgaggccaccaacaatccc
aagctctcctacatccaccccaatgctttctacaaactgcccaggctggagacgttgatg
ctgaatgggaacgcgcttagcgccctacacaggattactgtagagtctctccccaacctg
cgggaggtgagcatgcacagcaaccccatccgctgcgactgtgtggtccgctggatgaac
atgaacaagaccaacatacgcttcatggaaccggattctctcttctgtgtggagcctcct
gagtacgagggccagcacgtgcggcaggtccacttcagggaaatgacagagatctgtctg
cctctcatctcccctgaaagcatgcccgggcacgttagcgttgacaacgggagttctgtg
tcgctccactgccgggcctttgccgaacccgaaccggacatctactggatcacgccttct
ggtaccagggtcctgcccaataccgtttcagataagtactacatgcacccagaaggaaca
tttgacatttacgacgtaacagagaacgaggctggactgtacacctgtgttgcccacaat
ctagtcggcgcagacctgaagtcagtctctgtggaggtggatggatacttcccccgacct
gccaacggctctttggatgtcaacatcaaatcagtgcagaccaactcggtcctggtggcc
tggaaagccgcccatggcggtctggctcctaacataaagtggtacacggcttccgacccc
aaccgcccgaccatggcgttcactgcacgcgtaccgtctgatgtgaaagtgtacaatctc
acacatctgactcccgccacccagtacaaggtgtgcgtggacatccgcggcatcctctac
aaacacgacaccaaatgtgtcaatgtcaccacaaagggattagagctggcggccaaggac
actgaaaagtggcacgcggcagtaatcgctgtctttggtgtgcttctcgccgtgatttca
gtggcctgtctgcttatttatgtgtctctgaggaaccaccacctttgtggggatttaaag
aaatgccgctccaaagtgtccctgacgccggtggctggcctgcactctccttttacgagg
ctgtgggtctcagggaaaggactgccaaccgcggtggaagtgaaacccacagtcataaat
gtatctgacaatgccttttaa
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