Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393258
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Entry
139393258 CDS
T10872
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139393258
Membrane trafficking [BR:
ocla04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
139393258
Retrieval pathways
139393258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
139393258
NCBI-ProteinID:
XP_070997837
LinkDB
All DBs
Position
33:complement(7364855..7553158)
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AA seq
557 aa
AA seq
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MSTDGNKKQFWKRNTAKVPGSIQHVYGAQHPPFDPLLHANQIKAGNKPQMTPGGKPKKAT
TFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKQQEKQRQDDADA
SELEDREEEAHEEEVEEQWEEGEESTPEVSFACEPSPLSDGRLVKSLSEAPIGSPKDASL
HRQQSLPHRPTIPMVARIADQNTSGTPAMTEREASRLDKFKQVLAGPNTDLEELRKLSWS
GIPRHVRPITWKLLSGYLPANTERRESTLQRKRQEYFGFIEQYYDSRNDEHHQDTYRQIR
IDIPRMSPECLMLQPMVTEIHIDTPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGYV
QGINDLVTPFFVVYVFEYIKEEVENFDVSSLQEAALRNIEADSFWCMSKLLDGIQDNYTF
AQPGIQRKVKALEELVSRIDETVHIHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLWD
TYQAEPEGFSHFHLYVCAAFLVRWRKEILDQRDFQGLMILLQNLPTMHWGNEEVSVLLAE
AYRLKFAFADAPNHYKR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgacggaaacaagaaacaattctggaaaagaaatacagctaaggtccctggc
agcatacaacatgtgtatggtgctcaacatcctcctttcgaccctcttctgcatgctaat
caaatcaaagcgggcaacaagccccagatgacaccgggagggaagccaaagaaagccacc
accttccaggagtttgagagcatcaccagcgatgcctgggacgtgggggacgacgacgac
gagctgctcgccatggccgcacagaacctcaacatcgaggtcgtcatggaaaccgccaac
aaggtgatcgagaaccacagcaagcagcaggagaagcagagacaggacgatgccgacgcg
tcagagctggaggaccgagaggaagaggcgcatgaggaagaggtggaagagcagtgggag
gaaggggaggaatcgacccctgaggtgtcgtttgcttgtgagcccagcccgctcagtgat
ggcagactggtgaagtcactgagtgaggcccccatcggatcacctaaggatgcgtcgctc
cacagacagcagtcccttccccaccggcccaccatccccatggtggctcgtatagctgac
cagaacacctccgggaccccagccatgacagagagagaggcatcccgcctggacaagttt
aaacaggtcctggctggacccaacactgaccttgaggaattacgaaagttgagctggtct
ggaattccgcgccatgttcgtccaatcacgtggaagctcctttcgggttaccttcctgcc
aacacagagaggagagagagcacgctacagaggaagagacaggaatacttcggtttcata
gaacagtactacgactcgcgcaacgacgagcaccaccaagacacgtacagacagattcgt
atagacatcccccggatgagtccagagtgtctaatgctgcagcctatggtgaccgagatc
cacattgacacaccgagaactaatccccttattcctctctttcaacaagcttctgtccaa
gagatctttgagcgtatcctgttcatctgggcgatccgccacccggccagcggctacgtg
cagggcatcaacgacctcgtcacgcctttcttcgttgtctacgtctttgagtacatcaag
gaggaggtggagaactttgacgtgtccagcttgcaggaggcggctttgcgaaacattgag
gctgacagtttctggtgcatgagcaaattgttggacggcattcaggacaactacacattt
gcccagccggggatccaaaggaaagtcaaggctctggaggagttggtcagcaggatcgat
gaaacggtgcatatccacatgcagcagtatgaagtggagtatctccagtttgccttccgt
tggatgaacaacctgctgatgagagagctgccgttacgctgcacgatacgcctctgggac
acctaccaggctgaacctgagggattctctcacttccatctctacgtgtgtgctgctttc
ctggtacgatggaggaaagagattctggaccagagagatttccagggtctgatgattctg
ctgcagaacctacccaccatgcactggggcaacgaggaggtcagcgtgctcctggctgag
gcctacaggctgaagtttgccttcgctgacgcccccaaccactacaagagatga
DBGET
integrated database retrieval system
