Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393313
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Entry
139393313 CDS
T10872
Name
(RefSeq) putative helicase mov-10-B.1
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139393313
03036 Chromosome and associated proteins [BR:
ocla03036
]
139393313
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
139393313
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139393313
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
139393313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
MOV-10_Ig-like
MOV-10_beta-barrel
AAA_11
MOV-10_N
Mov-10_helical
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
AAA_16
AAA_7
Cep192_D4
Helicase_RecD
AAA
Mg_chelatase
PhoH
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139393313
NCBI-ProteinID:
XP_070997949
LinkDB
All DBs
Position
33:complement(8718351..8754353)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNLRTRCQVGLDFYEFLNETNRASTKLKSDLRDIYNSEFRNRDGVRDPNFSSMLYALKLS
NNAKVYSGVVHFKPKVRDFCQDQWQGPRGKGRGQKQQGASSSCPVQNGGKVNGVGQKNGA
CVSGVCVSPSSDPAQTSHTPRRDWRLANYILRKFKSDRAELISDRGGVRITSDHLVVDGL
IKFSLESETEVYVVCLFLENSSPSPLFFTYYSALHRMTCFNLQDKQKVTRNNPLQLGPGD
RYEVQLQFKSSLLGFYPATLVFEFKPSISSSSPAFHLLRFIEAQYVTGLARELAPTAPYR
PRAIISATDYLPYTVEDGEPPESLSANNLAAVERLYDYKVPGYVRDLIKFLKGHASSSTL
SLDAQSILESGLSRENYSKRFQLLLYLEELQMEVDIKRYNKPNTPMVRDKTNKKLLVLEV
PGVSESRPSVLRGDAILVTRSGDSNKGGVVKYRGYVHRVELDSVKLGFNSRFLSSFVDGL
KFDVEFTVNRLTTRLQQRATELADRHNLGNVLFPSGDPTIQPPKKQPLLLYDRALEQNPE
QYTAVQNIVAGSSRPAPYLVFGPPGTGKTVTVVEAIKQVLKTQSHAHILACAPSNSAADL
LALKLLEHLEHRKLFRMYAASRNPEDVPNDIRDCCNLGQDCFVFPCKEELMKYSIMVTTL
ITAGRLVTGGVPPGHFSHVFVDEAGHAVETETIISLAGLLQPETGQVVLAGDPKQLGPIL
RSPLALKHGMGVSLLERLMKDVSLYQKEEENGVFNSCYVTKLLRNYRSHPSILKVPNELF
YEEELQVFANEMIRNSYCTWEYLPQKNFPVVFHGVAGRDEREATSPSFFNVAEIEVLMDY
LKKLLQGQGKRGLATISPKDIGIIAPYRKQVEKIRKALKTLEKVFKSTSIKDLKVGSVEE
FQGQERRVILVSTVRSSAKYVQTDQYFSLGFVKNEKRFNVAVTRAKALLIVVGNPLVLRG
DPTWGRFLQFCSQAGGKTGFDSSQAEGEEEVVERLAALCLQADPHVETEESEVQQQIEPE
WRNEQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaagaacgcgttgccaagttggactggatttttatgaattcttgaatgaaaca
aatcgagcatcaaccaaacttaaaagtgacctccgagacatctacaactcagagtttcga
aacagggatggagtgagagaccctaacttcagttcaatgctgtatgctctcaagctgtcc
aataatgccaaagtctactcgggagtggtgcacttcaaaccaaaggtgagggatttctgt
caggaccagtggcaaggaccccggggaaaggggcgtggccagaagcagcagggggcatct
agctcttgtcctgttcagaatggaggcaaggtgaatggagtggggcagaagaatggggca
tgtgtgagcggggtgtgtgtgtcgccctcatctgacccagcccagacatcacacaccccc
aggagagactggagactggccaattacatcctcaggaagttcaagtctgacagagcggag
ttgatctctgaccgtggcggtgtacgcatcacttctgaccaccttgttgtagacggtctg
atcaagttcagtctggagagtgagaccgaggtgtacgtagtttgtctgttcctggagaac
tcctcccccagtcctctcttcttcacctactactctgctctgcaccggatgacctgcttc
aacctacaggacaagcagaaagtcacccgcaacaacccactgcagctgggaccaggtgac
cggtatgaagtgcagctccagttcaagtccagcctcctgggtttctatccagccactctg
gtctttgagtttaaaccctccatctcctcctcctctcctgccttccacctgctgcggttc
atcgaggcccagtatgtgacagggctggccagggagctggccccaactgcgccctacaga
cctagagctatcatcagcgctacggattatctgccttacactgtagaggacggggaacca
cctgagagtctctcagccaacaacctggcagccgtggagcgtctctacgactacaaggtt
ccaggatatgtcagagatctgatcaagttcctcaaaggacacgcctcctcctctactctt
tcactggatgcccagtctatcctagagtcaggtctgagtagagagaattactctaaacgg
ttccagctgctgctgtatctagaggagctacagatggaggtggacattaagagatacaac
aagcccaatactcccatggtccgagacaagaccaacaagaaactactggtgctagaggta
ccaggtgtgtccgagagccgtccgtctgtcctgcggggcgatgccatcctggtgacaagg
tcaggtgactctaataaggggggcgtggtcaaataccgtggttacgtccaccgtgtggag
ctggactccgtcaaactgggattcaacagcaggtttttgtcctccttcgtggatggtctg
aagtttgatgtggagttcacggtgaaccgtctcaccactaggcttcagcagagagcaaca
gagctggctgacagacacaacctggggaacgtactgttcccttctggagacccaactatc
caaccacccaaaaaacaacctctcttgttgtatgacagggctctagagcagaacccagaa
cagtacacagcagtccagaacattgtagctggatcctcccgaccggctccttacctggtg
tttgggccacctgggacaggtaagactgtgacagtggtcgaagccatcaaacaggtgctg
aagacacagagtcacgcccacatcctggcgtgcgctccgtccaatagtgcggcagacctg
ctggctctgaagcttctagaacacctggaacacaggaagctgttccggatgtatgccgca
tcccgtaaccctgaagatgtgcccaatgatatacgggactgctgtaacctgggtcaggat
tgctttgtgtttccctgtaaagaggaactgatgaagtacagcatcatggtcaccacccta
atcactgccggacggttggtgacaggtggtgttcctccaggtcatttcagtcacgtgttt
gttgacgaggcgggacacgccgttgaaacggagaccatcatatcactggctgggctgctc
caaccagagacgggtcaggtggttctagctggagaccctaaacagctgggacccatcctc
aggtctcctctggctctgaaacacggcatgggtgtgtctctgttggagaggctgatgaag
gatgtgtctctgtatcagaaggaggaggagaatggagtgttcaacagctgctacgtcacc
aaactactgagaaactacaggtctcatccctctatcctgaaggtgcctaacgagttgttc
tatgaggaggagctacaggtgtttgctaacgagatgatccggaactcctactgcacctgg
gaatacctgcctcagaagaatttcccggtggtgttccatggtgtggctggtcgtgatgag
cgggaggctaccagtccatctttctttaacgtggcggagatcgaggtgctgatggattac
ctcaagaagctgctgcaggggcagggcaagaggggcctcgccacaatctcacccaaagac
atcggtatcatcgccccctatagaaaacaggtggagaagatccgtaaagccttgaagacg
ctggagaaagtcttcaaatcgaccagcatcaaagacctgaaggtggggtcagtggaggag
ttccagggtcaggagaggagggtgatcctggtctcgacggtccgcagcagcgccaagtac
gtccagacagaccaatacttcagccttggtttcgtcaaaaatgagaagaggttcaacgtg
gcggtgaccagagccaaagccctgctgatcgtggtgggaaaccccttagtgctgcgagga
gaccccacctggggcaggttcctccagttctgttcccaggcgggggggaagacagggttt
gactcatcccaggctgagggagaggaggaggtggtggaacgcctagctgccctgtgctta
caggctgatccccacgtggagacggaggagagtgaggttcagcagcagatcgaaccagag
tggaggaacgagcagtga
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