Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393314
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Entry
139393314 CDS
T10872
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139393314
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139393314
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139393314
04121 Ubiquitin system [BR:
ocla04121
]
139393314
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139393314
Peptidases and inhibitors [BR:
ocla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139393314
Membrane trafficking [BR:
ocla04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
139393314
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139393314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
DUF5748
Motif
Other DBs
NCBI-GeneID:
139393314
NCBI-ProteinID:
XP_070997951
LinkDB
All DBs
Position
33:5911776..5952442
Genome browser
AA seq
1018 aa
AA seq
DB search
MAEGGAADLDTQRGEVAALLKTQLRKGDTWYLVDSHWFKQWKKYVGFDSWDKYQMGDQNV
YPGPVDNSGLLTSDGDVLAIKEHLIDELDYILIPTEGWNKLVSWYPLMEGQDPISRKVVE
QGMFVKHCKVEVYLTELKLCEDRNMDNVVTRRFSKADTIDTIEKEMRKLFSIPDERETRL
WNKYMSNTFEPLNKPDSTIQDAGLYQGQISMQVLVIEQKNEDGSWPRGSSAPKSSGTSNL
SALPKISPSSLTNNHNSSFNSRNVKNSSYSLPSYHPYNSYDCSEGRQSERAGLCGLSNLG
NTCFMNSALQCLSNVPPLTEYFLKDKYNDELNEDNPLGMKGEIAKAYAEITKQSWSGKYS
YVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYILLKDAEGRPD
KVVAEEAWENHIKRNDSIIVDIFHGLFKSTLVCPVCAKVSVTFDPFCYLTLPLPMKKERT
LEVYLVRLDPLARPTQYKLTVPKVGYISDLCTSLSTLSGVPAEKMIVTDIYNHRFHRIFA
TNENLSSIMERDDIYVFEVAVNRLEDTDHVVIPVHLREKYKQSGYNHTSTPLFGQPFLIT
VPRTLSEDKLYNMLLLHLCRFVRSVVEEEDTEETTPSSKQHIVNGNATNGVLEEGSPSEM
ETDEQDGDDESSQDQELPSENDNSQSEDSVGGGDNELENGVGPGGENSGTKGHQNQTSMT
MGEKKRLFTFQFNNMGKTDFSLIKEEPRHIRFDEGHLRLSDQSYLSLDWEPEVKKKHFDE
GITEDFEKHESMEYKPQKKAFFKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDL
WSLPPVLVVHLKRFSYSRYMRDKLDSLVDFPLSDMEMSEFLIDPNAGPCRYDLIAVSNHY
GGMGGGHYTAYAKNKDDDKWYNFDDSSVSPANEDQIVSKAAYVLFYQRQDTVKGTGYFNL
DREEEEEEEEEREEDGEEVEENREGKEERKSVASSQGASASVQSDEEDVNDNVTMKTK
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaggagcggctgatctggatacccagagaggagaagtcgcagcactgctg
aaaacacagctacgaaagggagatacttggtacctagtggacagccactggttcaaacag
tggaagaaatatgtgggctttgacagctgggacaaatatcagatgggagaccagaatgtc
taccctggaccagtggacaactcggggctccttacaagtgatggggatgttctggccatc
aaggagcacctcattgatgagctggactacatcctgatcccaacagaaggctggaataag
ctagtgagctggtatccactgatggagggacaagatcctatctcacgcaaggtggtagaa
cagggtatgtttgtgaagcactgcaaggtggaggtgtacctcacagaactgaagctgtgt
gaagaccgcaacatggacaacgtggtcaccagacgcttcagcaaagcggacacgatagac
accattgagaaggagatgcgtaaactgttcagtatcccagacgagagagagaccaggttg
tggaacaagtacatgagcaacacgttcgagcctctgaacaaaccggacagcaccatacag
gacgcaggactctaccaaggacagatatccatgcaggtcctggtaatagagcagaagaat
gaggatggatcgtggcctagaggttcctctgcacctaagtcatctggtacttccaatctt
tctgctttgccaaagatctccccttcatctctcacaaacaatcataacagcagcttcaac
agcaggaatgtgaaaaactccagctacagccttccgtcctaccacccttataacagctat
gattgctccgagggcaggcagagtgagcgggctggcctgtgtggtctttccaacctggga
aacacctgcttcatgaactctgcactgcagtgtttaagtaatgtacctcctctcaccgag
tatttcctgaaagacaagtacaacgatgagttgaacgaggacaaccctctgggaatgaaa
ggggagatcgccaaggcctacgctgagatcaccaagcagtcgtggtctgggaagtacagc
tacgtcacaccacggcctttcaagacccaggtgggtcgcttcgccccccagttctcaggc
taccagcagcaggactctcatgagctgctggccttcctgttggatggtctacacgaggac
ctgaaccgcatcaggaagaaaccctacatcctgctcaaagatgctgagggcaggcctgac
aaggtggtggccgaggaggcgtgggaaaaccacatcaagaggaacgactccatcatcgtg
gacatcttccacggcctcttcaagtccaccctggtgtgccctgtctgcgccaaggtctcc
gtcacctttgaccccttctgctacctgacgctgccgctgcccatgaaaaaggagcgcact
ctggaggtctacctggtcaggctggaccccctggccagacccacacagtataaactgact
gtgcccaaggtgggctacatatcagacctctgtacttcgctctccactctatctggtgtc
cctgctgagaagatgattgtaacagatatctacaaccaccggttccatcgtatctttgcc
accaatgagaacctcagcagcatcatggagagggacgacatctatgtctttgaggtggca
gtgaaccggctggaggacacagaccatgtggtgatcccagtccaccttagagaaaagtac
aagcagtcagggtacaaccacacctccactcctctgtttggccagcccttcctcatcact
gtccccagaacactcagcgaggacaagctctacaacatgctgctgctacacctctgccgg
tttgtgcgttctgtcgttgaggaggaggacactgaggagacaaccccttcttctaaacaa
catattgtcaatggcaatgctaccaatggggtcctggaggagggctctcccagcgagatg
gagactgatgagcaggatggagacgacgaatccagtcaggaccaggagctgccctctgag
aatgacaacagccaatcagaggactctgtgggtggtggggacaacgagctggagaatggg
gttggtccagggggagagaactcggggaccaaaggtcaccagaaccaaacgtctatgacg
atgggggagaagaagagattgtttacattccagtttaacaacatgggcaagactgacttc
agcttaatcaaggaggaaccgcggcacatccggttcgacgagggacacctcagactcagt
gaccagtcctatctctctttggactgggaaccagaggtcaagaaaaaacactttgatgag
ggtatcacggaggactttgagaagcatgagagcatggagtataagcctcagaagaaagcc
ttcttcaaactgaaagactgcatcgagctgttcaccaccaaagagaagctcggagccgag
gacccatggtactgtccaaattgcaaggagcaccagcaggccactaagaagctagacctg
tggtctctgcctccagtcctggtggtccatctgaaacgcttctcctacagcagatatatg
agggacaagctggattcactagtcgacttcccactcagtgacatggaaatgtcagagttc
ctgatcgaccctaatgctggtccctgtcgctacgatctcattgcggtctccaatcactat
ggaggcatgggaggaggacactatactgcttatgcgaagaacaaggatgatgacaagtgg
tacaactttgacgacagcagtgtctctccagccaacgaagatcagatagtgtccaaagca
gcgtacgtgctgttctaccagcgccaggacacagtgaagggaacaggctactttaatctg
gaccgagaggaggaggaggaggaggaggaggagagagaggaggatggagaggaggtggag
gagaacagagaagggaaggaggagaggaagagcgtcgcctcatcccagggagcctctgct
tcagttcagagcgacgaagaggatgtcaacgacaatgtcaccatgaaaaccaaatga
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integrated database retrieval system
