Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393339
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Entry
139393339 CDS
T10872
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139393339
03036 Chromosome and associated proteins [BR:
ocla03036
]
139393339
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139393339
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139393339
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
139393339
microRNA pathway
RISC loading complex
139393339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
139393339
NCBI-ProteinID:
XP_070998077
LinkDB
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Position
3:complement(32211861..32258371)
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AA seq
867 aa
AA seq
DB search
MEIGTTGAVGAQPLFTVPRRPGYGTMGKPIKLLANCFQVDIPKIDVYLYEVDIKPEKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSVPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYESDPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTD
QLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEV
KRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPII
FLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQDLASMVRELLIQ
FYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACIGLEKEYQPGITYIVVQKRHH
TRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDN
CFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSG
QSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacgacaggagccgttggagcccagcccctattcactgtgccacggcgg
cctggctatggcaccatgggaaagcccatcaagctgctggccaactgcttccaggtggat
atccccaagatagacgtctacctctatgaggtggacatcaagccagagaagtgcccgcgc
cgcgtcaacagagaggtggtggactccatggtgcagcacttcaaggttaccatctttggg
gatcgtcggccagtctacgatgggaagaggagcttgtacacagccaacccgctgcctgtg
gcaaccgcaggggtggatctggatgtcactctaccgggtgaagggggcaaggaccggccc
tttaaggtctcaatcaagtttgtgtctctggtgagctggcacatgctgcacgaggtgcta
accggccgcagcgtgcctgagcccctggagctggacaagcccatcagcaccaacccagta
cacgctgtggacgtggtgctgcgacacctgccctccatgaagtacactccagtgggccgc
tccttcttctcagccccagagggctacgaccatcccctgggagggggcagagaggtgtgg
tttggtttccaccagtctgtacgccccgccatgtggaagatgatgctcaatattgacgtg
tctgccacggccttctacaaagcccagccagtgatccagttcatgtgtgaggtcctggac
atccacaacatagacgagcagccccgacctctcacagactcccaccgggtcaaattcacc
aaagaaatcaaaggtctgaaggtggaggtcacacactgtggcaccatgcggaggaagtac
cgtgtttgcaatgtgacccgtcggcccgccagccatcaaacgttccctctgcagctggag
aatggtcaaacggtggagcgcacagtggcccagtacttcagagagaagtacagcctacag
ctcaagtatccccacctgccctgcctccaggtggggcaggagcagaagcacacctacctg
cccctggaggtgtgtaacatagtagcagggcagcgctgtatcaagaaactgacagataat
cagacgtccactatgatcaaagccacggctcgctctgcacctgacagacaggaggagatc
agccgactggtgcgcagtgccaactacgagtctgacccctttgtgcaggagtttcagttc
aaggtgcgcgacgagatggcccacgtgacggggcgcgtgctgcctgcccccatgctgcaa
tacggcggcagggtgagcacagagcactttatgaaccggacggtggccaccccaagtcac
ggggtgtgggacatgaggggcaaacagttccacacgggagtggagatcaagatgtgggcc
atcgcatgttttgccacacagaggcagtgtcgcgaggagatcctcaagggtttcacagac
cagctgcgtaagatctccaaggatgctgggatgcccatccagggccagccgtgtttctgt
aaatacgcccagggagccgacagtgtggagcccatgttcaggcacctgaagaacacctac
tctggactgcagctcatcatcgtcatcctgcctggaaagaccccagtctatgcggaggtg
aagagggtgggagacactctcctaggaatggccactcagtgtgtccaggtgaagaacgtg
gtgaagacgtccccccagaccctctccaacctctgcctcaagatcaacgtcaagctgggg
ggaatcaacaatatcctggtgccccaccaacgaccctcagtattccagcagcctatcatc
ttcctgggggcggacgttacacacccccctgctggagacgggaagaagccctccattgct
gcagtggtgggcagtatggacgcccaccccagcaggtactgtgccacagtccgggtccag
aggcccaggcaggaggtgatccaggatctggcctctatggtccgagagctgctgatccag
ttctacaagtcgacccgctacaagcccaccaggatcatcttctacagggacggcgtgtca
gagggccagttcagacaggtgttgtactacgagctgctggccatccgcgaggcttgcatt
ggcttagagaaggagtaccagcccggcatcacctacatcgtggtccagaaacgccaccac
acccgcctcttctgtgccgaccgcaacgaaagggttggacgcagtggaaacattcctgct
ggcaccacggtggacacggacatcacgcacccctacgagtttgacttttacctctgcagt
cacgctggaatacaggggaccagtcggccctcccactaccacgtcctgtgggacgacaac
tgcttcacggccgatgagttccagctgctcacctaccagctgtgccacacctacgtgcgc
tgtacccgttccgtctccatccccgcgccagcctactacgcccacctggtggccttccgt
gcccgctaccatctggtggacaaggagcacgacagtgcggagggcagccatgtctctggt
cagagtaacggtcgggacccccaggctctggccaaggcggtgcagattcaccacgacacg
ctgaggaccatgtacttcgcctga
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