Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393669
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Entry
139393669 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel gamma-3 subunit-like
KO
K04868
voltage-dependent calcium channel gamma-3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139393669
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139393669
04261 Adrenergic signaling in cardiomyocytes
139393669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139393669
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139393669
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Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
139393669
NCBI-ProteinID:
XP_070998112
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All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MKLCNRGALMLVTTALSFIAFSLMTIAVGTDYWLYSRGVCRSKTSLHDNETIRKNEVVMT
HSGLWRTCCLEGTFTGVCKEIDYFLEDADYEQDAAEYLLRAVRASSIFPIMSVGLLFLGG
VCVAGSEFYKTQHNVMLSAGILFVSAGLSNIIGIIVYISANSGDPGQSDSKKSYSYGWSF
YFGALSFILAEMVGVLTVHAFIERHRKLRTRGRRSFTKHALFRSASYYSRYNRYRRRSSY
RGNVDYRHSLSSAGQLRPRDHSPLPVALSVSKVVAAGPELASHKLTPPDNKMAAAGGGGG
GGGGGGGGGVDVARSVFLLPLTSKPNNKDMLPSNAANRKTTPV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtgtaaccggggagcgctgatgctggtcaccacggcgttatccttcatagcg
ttcagcctgatgaccatcgcagtgggaacggactactggctgtactcccggggcgtctgc
cggtccaagacgtcgctccatgacaacgagaccatccgcaagaacgaggtggtgatgact
cactccgggctctggcgcacctgttgtctcgaagggacgttcacaggggtgtgtaaagaa
attgattatttcctcgaggatgcagactatgagcaggatgctgcagaatacctactgaga
gcagtgagagcctccagtatattccccataatgagtgtaggtctgttgtttctgggagga
gtctgtgtggccggcagcgagttctacaagacacaacacaacgtcatgctcagcgctggc
atactgttcgtctccgcaggactcagtaacatcattggcatcatcgtctacatctcggct
aactctggtgacccgggtcagagcgacagtaagaagagttactcctacggctggtctttc
tacttcggggcgttgtccttcatcttggctgagatggtgggcgttctgacagtacacgcc
ttcatagagcgccaccgaaagctccggacccgcggccgccgttccttcaccaaacacgct
ctgttccgctccgcgtcctactacagccgctacaaccgctacagacgccgctccagttac
cgcggcaacgtggactaccgtcactcgctctcgtcggcggggcaactgcgacctcgcgac
cactcgccgttgccggtggccctgtccgtgtcaaaggttgtcgccgcggggccggagttg
gcctcgcacaaactaacgccgcccgacaacaagatggcagccgctggaggaggaggagga
ggaggaggaggaggaggaggaggaggggtggatgttgcgaggagcgttttcctgttgcca
ctgacaagcaagcccaacaacaaggacatgttgcctagcaatgctgctaacaggaagaca
acacctgtctga
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