Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393677
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Entry
139393677 CDS
T10872
Name
(RefSeq) calcium-activated potassium channel subunit beta-4-like
KO
K04941
potassium large conductance calcium-activated channel subfamily M beta member 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
139393677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139393677
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
139393677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CaKB
Motif
Other DBs
NCBI-GeneID:
139393677
NCBI-ProteinID:
XP_070998121
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MAKMRVSYEYSEAEDKSIRLGLFLIVCGILSLFILGFCWLSPTLQSMQSKPANCTVVSVL
RPEEMFECVFTCGADCKGTSLYPCLQIFVNNSESNSVALLHFDEQQLVLNPKCSYVPPCE
RDNQKNKDNVLWWEDYWTKEVSSQSFTCFFNQQRRPDDVLWRRSHDASVLLHCVLWPMVS
LLVGTLIVLLTVCARSLAVRAEAIQKRKCSYEPAGNSEQGKTPPNTNTASFRTLPMFAVP
VRRRDREQEH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaatgagggtgtcatacgagtactcggaggcggaggataagagtatccgacta
ggactgttcctcatcgtctgtggcatcctgtccctctttatcctcgggttctgctggctc
agtccaactctacagagcatgcagagcaaaccggccaactgcacggtggtgtccgtgctc
agaccggaggagatgttcgagtgcgtgttcacgtgcggggcggactgcaaggggacctcg
ctgtatccgtgtctgcagatattcgtcaataattccgagtcgaactccgtggctctgctg
cactttgatgaacagcaactggtgctgaacccaaagtgctcgtacgttcctccatgtgag
agggacaaccagaagaacaaggacaacgttctgtggtgggaggactactggactaaagag
gtcagctcccaatccttcacctgtttcttcaaccagcagagaaggcctgacgacgtactg
tggcggcgctcccacgacgccagcgtcctcctccactgcgtcctgtggcccatggtgagc
ctgctggtgggtaccctcatcgtccttctcaccgtgtgcgcccgcagcctggccgtgcgc
gccgaggccatccaaaagaggaagtgctcgtacgagccggcaggcaactcagagcagggc
aagacgccgcccaacaccaacaccgcctccttccggaccctgccgatgttcgctgtccct
gtccgacgcagagaccgggaacaggaacactag
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