Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393699
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Entry
139393699 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-4-A-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139393699
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139393699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
139393699
NCBI-ProteinID:
XP_070998145
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESSGRSIADSRVTASAQTPVYCPVYESRLLATA
RHELSSAAALGVYGNPYTGSQGYGNYVTYGTDASAFYSLGTFDTKDATAPAHAGITQATA
YYPIDPTLGHYQYDRYGCMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRYDEDDEASQEENINSENNDDGQ
SWFFIQQINKKDKDLALSDLDDFDMIESESSECELKHQYLMNTHMTTTDCSNDHLKDTSL
KISIPVSLGGEQQHSKTSPEGCDSRQGKACYQQQILDGKPRIWSLAQTATSLNQAEYPSC
MLRCQPQPGLPTSPAASSPITVLDRRQDSPVTTLRNWVDGVFHDPLFRHSTLNQALTNTT
VSWTTTTKGSILETGALERSVGSVKGLPSLQHQDSTKDNMNFPKTVNKHFCS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaattcggatatccctactcgtctgcaccacaattcctcatgacaacc
aactcgttgacaacttgctgcgagtcaagcggcagaagcatcgctgactccagggtgaca
gcctccgcccagacgccggtctactgcccagtgtacgagagccggttgttggccaccgcc
agacacgagctgagctccgcagctgctctgggggtgtatgggaacccgtacactgggagt
caaggctatggaaattacgttacttatggaaccgacgcgtctgctttctactcgctgggg
acattcgataccaaagatgcaacagcgcccgcgcatgcagggataacccaggctacagcg
tactatcccattgaccccactctgggacattatcagtacgacagatatggctgtatggac
ggagggaccaggaggaagaacgccacccgggagacaaccagcacactgaaggcctggcta
caggagcacaggaagaacccctaccccaccaagggagagaagatcatgttggccatcatt
actaaaatgaccctgacgcaggtgtccacctggtttgccaacgccaggaggaggctgaag
aaggagaacaagatgacgtggcctccgaggaacaagtgttctgatgagaagagatatgat
gaggatgatgaagcatctcaggaggagaacatcaacagtgagaacaacgatgatggtcag
tcctggttctttatacaacaaattaacaagaaagataaggatctcgcgctgagtgacctg
gatgacttcgacatgatcgaatcagagagctcggagtgcgagctcaaacaccagtacctc
atgaacactcacatgacgacaactgactgttcgaacgaccatctgaaggacacatcttta
aagatcagcatacccgtgtccctgggcggggagcagcagcacagtaaaacctcaccagag
ggctgcgacagccggcaggggaaagcttgctaccaacaacagatactggacggcaaacca
cggatttggtcgttggcccagacggccacgtctctgaaccaggcggagtacccgtcctgt
atgttgaggtgtcagcctcagccgggcctgcccacctctccggccgcctcctcccctatc
acggttctagacagacggcaggactctcccgttacaactctcagaaactgggtggatggg
gttttccacgatccgttgttcagacacagtactttgaaccaggccctgaccaacaccacg
gtctcgtggaccacgaccaccaagggttcgatactagagaccggtgctctggaacgttct
gttgggagcgtcaaaggacttccgtctctacagcaccaagactccacgaaggacaatatg
aatttccctaaaactgttaacaaacacttctgctcttaa
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