Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393723
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Entry
139393723 CDS
T10872
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139393723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139393723
Membrane trafficking [BR:
ocla04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
139393723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
139393723
NCBI-ProteinID:
XP_070998177
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MATSAGFKVLYEHDGVFIHTNPERSEEQDSLTSGSLRVLDQDGDIVLEYKPVEDVDHSAM
LCAAKESSSVFEWGQRHQGPSQDPGDKPTRQVEHHLGYETEWDMVHTVQFRKKPSNNEGA
PPHPAPIPEKSKGSRLFFRLSDLASVRVKEEGWSYLVFTLRDRNMGVELPALHFHQGGSE
VFLDCLRKYLLLTESTTDASLLQVSPHSRALSQTFENLLDDATFGLITKFSQDPVTTTLG
GFSKVTNYLFDAFRGPDTVLLKQRPVGEVADLLNEAIPGLDINQLEEPGFEVITRIDLGV
LPEVRRREPVGAEEWNTNMDPEGRMRNISHLKQTIFKGGLCHVLRKEGWKFLLGYFPWES
TLEERRSLTRRKTDEYFRMKLQWKSVSEEQEKHNSMFRDHRSLIEKDVNRTDRTNTFYEG
QDNPGLILLHDVLMTYCMYDFDLGYVQGMSDLLSPILYVMEDEVDAFWCFVSFMDQMHQN
FEEQMQGMKTQLIQLSTLLRLLDLSFWNYLVAQDSGHLYFCFRWLLIRFKRELSFPDVLR
LWEVMWTGLPCQNFHLLVCCAILDSEKHQIMEEQYGFNEILKLINELPMKLDIVAILNKA
EAICLQLKSCKDLPNSVVEMLGFINGTDTESSSQSEDTERTDRPDSPEPSTPPDNQQDLV
SVFNPSGNNGHLRDAARDVYKLAYIS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttcagcgggcttcaaggttctatatgagcatgatggagtttttatacacacc
aacccagaaaggagtgaggagcaggattctctgacttcgggatccctgcgtgtcctggac
caggatggagacatagtgctggaatataaacccgtggaagatgttgaccactctgccatg
ctgtgtgctgccaaggagtctagctctgtgtttgaatggggccagcggcaccagggtccg
agccaagacccaggagacaagcctaccaggcaggtggagcaccatctgggctatgagaca
gaatgggacatggttcacactgttcagttcaggaagaaacccagcaacaatgaaggtgct
cctcctcaccccgctcccatcccagagaagagtaagggttcccggctgttcttccgtctc
agtgacctggcctcggtcagggtgaaggaggagggctggtcctacctggtgttcaccctc
agagaccgcaacatgggggttgagctgcctgccctacactttcaccagggaggtagtgaa
gtcttcctggactgtctcaggaaatacctgctgctgacagagtctaccacagatgcctcc
ctcctccaggtcagcccccacagcagagctctgtcccagacctttgagaacctgctagat
gatgccaccttcggacttattacgaagttttctcaggacccagtcaccactacgctgggt
ggtttctccaaggtgaccaactacctgtttgatgcgttccggggtccagacacagtgcta
ctgaagcagaggcctgttggggaggtggctgacctgctgaatgaggccatacctggactg
gacatcaaccagctggaggaaccaggctttgaggttatcaccaggattgatcttggcgtg
ctgccagaggtccggcgtagggagcctgttggggcggaggagtggaacaccaacatggac
cctgagggacgcatgaggaatatctcacacctcaaacagaccatattcaaagggggtctg
tgtcacgtgttgaggaaggagggatggaagtttctgctgggctacttcccctgggagagc
accctggaggagaggaggagtttgaccaggaggaaaacggatgagtacttccgtatgaag
ctccagtggaagtcagtgagtgaggagcaggagaaacacaacagcatgtttagagaccac
aggagtctaatagagaaagacgtgaacaggacagatcggaccaacactttctatgaagga
caagacaacccaggactgattctgctgcacgatgtcctcatgacctactgcatgtatgac
tttgacctgggctatgtccagggtatgagtgacctgctgtctccgatcctctatgtgatg
gaggacgaggtggacgccttctggtgctttgtctccttcatggaccagatgcaccagaac
tttgaggagcagatgcagggaatgaagactcaactgatccagctcagcacactgctacga
ctattggacctgtccttctggaactacctggtggcccaggactctggtcacctgtacttc
tgcttccgctggctcctgattcgcttcaagagagaactgagtttccctgatgtcctgcgt
ctttgggaggtaatgtggaccgggctgccgtgccagaacttccacctgctggtgtgctgt
gccatcctggactcagagaaacaccagattatggaggaacaatacggcttcaatgagatc
ctcaagctcataaatgaactgccgatgaaactggacatcgtggccatcctcaacaaagct
gaagctatatgcctgcagctgaagagttgtaaggatttgcccaactctgtggttgagatg
cttggattcatcaacggcacagacacggagtcatcatcccagtcagaggacactgagaga
acggacagaccagactctcccgaaccttctacaccgccagacaaccaacaggacttagtc
tctgtgttcaaccccagcggcaacaacggacacttacgggacgcagcgcgtgacgtttac
aaattagcttacatatcgtag
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