Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139393932
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Entry
139393932 CDS
T10872
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Glutamate (ionotropic)
139393932
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NCBI-GeneID:
139393932
NCBI-ProteinID:
XP_070998210
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Position
3:complement(34339372..34459655)
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AA seq
921 aa
AA seq
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MRNTWLSARSSILEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKR
KGLNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDGATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIPNLGGIFIVLACGLVLSVFVAI
AEFIYKLRKTAKREQRSFCSAMVDEIRQSFTCGTRVKHKPHHQVPVMVKTDAVINMHTFN
DRRLPGKDNLSCNTGMTPVFP
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacttggttgtctgcccggagttcgattttggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
attttcgaacaaacagagggaccagtgccgctcgtcagcccagaagagcttgcctttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacaacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccgtcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcgatggaaacatcaccct
atggacaacagggacacattttacgccaacctatacccggattactcttctctcagctac
ggcatcttggatttggtgcagttcctgaagtggaaaacagccacggtcgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaaaattcgccagctccctcttgacggtgaggacaccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattattttcgattgcagccatgaaatggctgcacagatc
cttaagcaggcccagacaatgggaatgatgacagaatactaccactacatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaagggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccacaagccttggaggttcggcgggcgcttt
atgaacttcatcaaagagtctcactgggaaggcctgacggggaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaagagggcctg
gagaaggtggggaagtggagtgcttccggaggtctcaacatcaccgaggtccccaagcgg
aaagggttgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggaaccatatgtcatgcttaagaagtctgacaaggcgctggtgggcaatgaccgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggttgtggacttctcaaagcccttcatgagcatgggcatcagcatc
ctgtaccgcaagcccaacaccaccaacaacggtttcttctccttcctcaaccccatgacc
cctgacatctgggtctacatcctgctagcctacctaggcgtaagctgtgttctcttcgtc
atcgccaggttcagtccgtacgaatggtacgacgcccatccctgcaatcccggatccgat
gtggtggagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcatcatctcctcctacacggccaacctggccgccttcctcact
gtggagcgcatggagtcgcccgtggactctgccgacgacatcgccaagcagaccaagatt
gagtatggtgtggtcaaagacggtgccaccatgtctttcttcaagaaatcaaaggtgtct
acttttgagaagatgtgggccttcatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggagtccacc
acaatcgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcatcctggaagatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggatgaagagcgccgtgagaaagccggccccatgggcattccgaac
ctgggagggatctttatagtgctggcgtgtggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcagaggtctttctgcagt
gccatggtggacgagatcagacagtcgttcacctgcgggacacgtgtgaaacacaagccc
caccaccaggtcccggtcatggtcaagacggatgcagtgatcaacatgcacacgttcaac
gaccgacgactcccgggaaaggacaacttgagctgcaacactgggatgacccccgtgttc
ccgtga
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