Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394155
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Entry
139394155 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139394155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139394155
NCBI-ProteinID:
XP_070998294
LinkDB
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Position
Unknown
AA seq
457 aa
AA seq
DB search
MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSSELAGNQSAAAAAVTSVLGMYANPY
TAHNYSAFLPYSSADLALFSQMGSQYELKDSPGVHPGSFAAHTSPAFYPYGQFQYGDPAR
PKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGARSKEDEDGNIFGSDNEGDAEKNDDEEEIDLESIDIDKIDDNDGDQSNEEDDDKPE
GRERNRELDSLEKRRAFALQHEAFDKSKNSISSGKELSDSNSNTRVVSPDRQGSFQLPVN
NKPKIWSLAETATSPDSSVKSTSPSGPTGHTPPQMQHPAFLPSHGLYTCQIGKFHNWTNG
AFLGQNSLLNVRSFLGVNQHHHHNLHLQTQLQQQQASVLVSPGASPQLSPKHIDRENVVR
SASPPTQSLKSSFRPLHDGPRTQQEAPQLVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagttgggctaccctcagtacttaagtgcctcccaagcggtgtacggc
ggggatcgcccgggggtcctgactccgtcgtcccggggagggagctctgagttagcggga
aaccagtcggctgctgcggctgcagtcacctcggtgttgggcatgtacgcaaacccctac
actgcacacaactacagcgcattcctgccttacagcagcgcagacctggctctgttctct
caaatgggctcccagtacgagctgaaggatagtcctggcgtgcaccccggcagcttcgcg
gcccacacctcgccagctttctacccttacggtcagttccagtacggggacccggccagg
cccaagaacgcgacccgggagagtaccagcacgctgaaggcctggctcaatgagcacagg
aagaacccctaccccaccaagggagagaagatcatgttggccatcattactaagatgacc
ctgacgcaggtgtccacctggttcgctaacgccagaaggaggttgaagaaggagaacaag
gtgacgtggggagccaggagtaaagaggacgaggatggaaacatcttcggctccgacaac
gagggagacgcggagaagaacgatgacgaggaggagatcgatctagagagcatcgatata
gacaagatagacgacaacgatggagatcagagcaatgaggaggacgatgataaaccggag
ggcagagagcgaaaccgagaactggacagtctggagaaacggcgggccttcgctctgcag
cacgaggccttcgacaaatctaagaactcaatttcctccgggaaggaactttctgatagc
aacagcaacaccagagttgtgtccccggacagacagggaagttttcagctcccagtgaac
aataagcctaaaatctggtcgttagctgagacggctaccagtcctgatagttctgtcaag
tccacctctccctccggccctaccggtcacaccccgcctcagatgcaacacccagccttc
ctgccctctcacggactatacacctgtcagataggcaagttccataactggaccaacgga
gctttcctggggcagaactctctgctcaatgtccggtcgtttctaggagttaatcagcac
catcatcataacctccacttacagacccagctgcagcagcagcaggcctcggtgttggtg
tcgcctggagcctcgccacaactcagccccaagcacatagaccgtgaaaacgttgtaaga
agtgcctctcctccaacgcaatctctgaagtcctcattcagaccccttcatgatggcccc
aggactcagcaagaagccccgcagctggttctaacggccctctcctcggcttga
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