Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394251
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Entry
139394251 CDS
T10872
Name
(RefSeq) calsyntenin-3-like isoform X1
KO
K22661
calsyntenin 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139394251
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Cadherin related
139394251
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
139394251
NCBI-ProteinID:
XP_070998381
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Position
3:35221153..35261249
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AA seq
998 aa
AA seq
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MKSRYLRFSFFLRRRIAELQKRGCYEGSVGYQNTSLTTMDRMSCLSFLLLCLTSVANGNK
ANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPLHYAGEICGFRVHNGPSGSSSVQ
FEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDCGEGPDGANSKKSHKATVHVRVN
DVNEFSPVFVERRYEASVPEGRLFDHIVRVEALDADCSPQYSQICFYDIITPNVPFVIDN
DGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQVVVTVKPSCKPGWIGWSKRVEYT
PGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKGCDRDSYSDRSVRRLCGAVRGEV
DLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAMVPDSIAAAVSGDHFTLQLWMRR
GGINTQPPTNQVRGNRREEETIVCSTVKNGQSNDDSFSHYSLSVHGCRLSLFYWPDVSAA
RPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPALIHDNGAIPNPAPRQRLVI
GACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGVTVRPGSVEPHSVVECLYACREG
LDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVTYRNSLRFATPGVRPLKLT
TSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGPHLARPAPEFEGPRGVPLFPELR
IVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPLGEELNPEREELLVDMDALRERG
LEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERRFRLSCSEMNGRYTSNELT
LEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGHTLPNPHRNSVVPGAATVIIMVC
VGFLVVMVILGVFRIRSIHRRGEGTGGGSKEDSGQWDDSALTIIVNPMESYESRMGISAD
TEGEGEEDEEVVESPDDANDDQRIIIKKEGRDGNPRRY
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccgatacctgcgctttagtttttttttgcgtcggaggatagctgagctgcaa
aagcgcggatgctacgagggtagcgttgggtaccaaaacacctcactcaccacgatggac
agaatgagttgtctctccttcctcctcctttgcttgacttcggttgccaatggcaacaaa
gccaataagcacaagccatggatcgagacggagtaccagggtattgtcatggagaacgac
aacaccgttcttctcaacccaccactgttcgccctggataaagacgctccactgcactac
gcaggtgagatctgtggcttccgggtgcacaatgggccctcgggatccagttcggtccag
tttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaagagcca
ttggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgtggagag
ggccccgatggagccaacagcaagaagtcccacaaggccacggtgcatgtacgtgtgaac
gacgtaaatgagttctccccagtgtttgtggagcgtcgctacgaggcctccgtcccagaa
ggccgtctgttcgaccacatcgtgcgcgttgaggccctcgacgcagactgctccccgcag
tacagccagatctgcttctacgacatcatcacccccaacgttccctttgtcatcgataac
gatggtaacattaagaacacagagccattggattcgaagcgccagcgtgtccacaccttc
tgggtgaccgcgttcgactgtggcaagaaccgagctcaggccgacgcccaggtcgtcgtc
acggtcaaaccgtcctgcaaacccggctggatcggctggtcgaagcgggtggagtatacc
cccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaagagact
gtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggctgtgac
agggacagctactcagaccgatcagtgcgtagactctgtggtgctgtgagaggtgaagtg
gacttactcccgcccccgtccccagcagccaattggacctcagccttgcccaccctccct
tcttctgattcatccctggtgttctccttcaatggctccacccatgttgccatggtaccc
gactctattgccgcggccgtatccggagaccatttcaccctccagctgtggatgagaagg
ggtggaatcaacacccagcctccgactaatcaggtcagaggaaaccgcagggaggaggag
actatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcccactac
tctctctccgttcacggctgccgtctatctcttttctactggcccgatgtctccgctgcg
cggcccgtaaaattcctctggaaactggagcaggtgtgtgacagcgaatggcatcacctg
tccctcagtgtccagttcccctctgtgacactgtacgtggacggagtcaccttcgacccc
gccctcatccacgacaacggagccatacccaaccctgccccacgacagcgactggtcatt
ggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatccctgag
gggaaagacacagggaagtatgtgggtggttaccgtggcttgttgtcaggggtgacggtg
cggccagggagtgtggagcctcacagtgtggtggagtgtctgtacgcctgcagggagggg
ttggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaaccccagt
cagtctgtgctggttctagagggtgatgacattgagagcttcaacagggccgtgcaacag
gtcacctacaggaactctctccgcttcgccacccctggagtcaggccactcaaactgacc
acctcactcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggagggctac
ctggtggtccttcagcccgatgcccctcagatctccctgtctggggtcgggccccacctg
gcccgccccgcgcctgaatttgagggcccccgtggtgtacccctcttcccagagctgagg
atcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggagggaggagct
ctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctgggggaa
gagctaaacccagagagggaggagctcctggtggacatggatgccctgagagagaggggt
ctggagataatcaacaccactgcttacatcgccatcacaggagctgagtccatctccgtg
tatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgctttgag
aggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgagctcaca
ctggaggtgaacttcctgcactccctggacagtctgtaccacccgtctcacctcctggcc
tcccagcagcagttccttcacccatctcaccactctggggagctgagtggacacaccctg
cctaacccccaccgcaactcggtggtgccaggagcggccacagtcatcatcatggtgtgc
gtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatccaccgc
cgtggcgagggcaccgggggagggtctaaggaggatagcggccaatgggatgactctgcc
ctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctcagctgac
accgaaggtgaaggggaggaggacgaggaagtggtggagtcacccgatgacgccaacgac
gaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctactaa
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