Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394275
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Entry
139394275 CDS
T10872
Name
(RefSeq) voltage-dependent calcium channel gamma-3 subunit-like
KO
K04868
voltage-dependent calcium channel gamma-3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04010
MAPK signaling pathway
ocla04260
Cardiac muscle contraction
ocla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
139394275
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
139394275
04261 Adrenergic signaling in cardiomyocytes
139394275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139394275
Ion channels [BR:
ocla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
139394275
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Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clarin-2
Motif
Other DBs
NCBI-GeneID:
139394275
NCBI-ProteinID:
XP_070998404
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MKLCNRGALMLVTTALSFIAFSLMTIAVGTDYWLYSRGVCRSKTSLHDNETIRKNEVVMT
HSGLWRTCCLEGTFTGVCKEIDYFLEDADYEQDAAEYLLRAVRASSIFPIMSVGLLFLGG
VCVAGSEFYKTQHNVMLSAGILFVSAGLSNIIGIIVYISANSGDPGQSDSKKSYSYGWSF
YFGALSFILAEMVGVLTVHAFIERHRKLRTRGRRSFTKHALFRSASYYSRYNRYRRRSSY
RGNVDYRHSLSSAGQLRPRDHSPLPVALSVSKVVAAGSELASHKLTPPDNKMAAAAGGGG
GGGGGGGGGGGGGVDVARSVFLLPLTSKPNNKDMLPSNAANRKTTPV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtgtaaccggggagcgctgatgctggtcaccacggcgttatccttcatagcg
ttcagcctgatgaccatcgcagtgggaacggactactggctgtactcccggggcgtctgc
cggtccaagacgtcgctccatgacaacgagaccatccgcaagaacgaggtggtgatgact
cactccgggctctggcgcacctgttgtctcgaagggacgttcacaggggtgtgtaaagaa
attgattatttcctcgaggatgcagactatgagcaggatgctgcagaatacctactgaga
gcagtgagagcctccagtatattccccataatgagtgtaggtctgttgtttctgggagga
gtgtgtgtggccggcagcgagttctacaagacacaacacaacgtcatgctcagcgctggc
atactgttcgtctccgcaggactcagtaacatcattggcatcatcgtctacatctcggct
aactctggtgacccgggtcagagcgacagtaagaagagttactcctacggctggtctttc
tacttcggggcgttgtccttcatcttggctgagatggtgggtgttctgacagtacacgcc
ttcatagagcgccaccgaaagctccggacccgcggccgccgctccttcaccaaacacgct
ctgttccgctccgcgtcctactacagccgctacaaccgctacagacgccgctccagttac
cgcggcaacgtggactaccgtcactcgctctcgtcggcggggcaactgcgacctcgtgac
cactcgccgttgccggtggccctgtccgtgtcaaaggttgtcgccgcggggtcagagttg
gcctcgcacaaactaacgccgcccgacaacaagatggcagccgctgcaggaggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggaggggtggatgttgcgaggagcgtt
ttcctgttgccactgacaagcaagcccaacaacaaggacatgttgcctagcaatgctgct
aacaggaagacaacacctgtctga
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