Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394279
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Entry
139394279 CDS
T10872
Name
(RefSeq) peroxisomal targeting signal 1 receptor-like isoform X1
KO
K13342
peroxin-5
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
139394279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139394279
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139394279
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_7
CFAP70_mid_TPR
TPR_Slam
TPR_20
RMD1-3
CFAP70_TPR_C
ANAPC3
TPR_9
TPR_10
PEX18_PEX21_C
CABIN1_N
Connexin50
Motif
Other DBs
NCBI-GeneID:
139394279
NCBI-ProteinID:
XP_070998410
LinkDB
All DBs
Position
3:35261718..35277205
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AA seq
678 aa
AA seq
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MAMRELVEGECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFMQQA
PPRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWTSEFLSGADAAAAASS
GQAGLGDPADADWTREFITDGTDPGRWAEEYLEQSEEKLWLGDLGEREQDWTKEYLPGDE
LKQTANELVAKVNDPKLQNTEFLRFIRQIGEGSVTVEDRAGKQHTDRAQAKEAQNWASNL
NQFLEETGGGTLPSTTQEWDQKIAKAKAKQAHQWASVVKQVSVESAESWVDEFATAGPDF
QQAKAAVESDLDFWEKLQQEWEEMAKRDAESHPWLSDFDQMLSSSYDKGYQFEEDNPYMS
HQDPLAEGVRRMEAGDIPGAVRLFESAVQREPDNQLAWQYLGTCQAENEQEFAAISALRR
CIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPAYRPVLEQSEREREKDGGTR
ERERFGSLLPDSLFTEVQSLFLSAANSDPARVDPQLQCGLGVLFNLSGEYDKAVDCFTAA
LSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFIRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQASGEGETVSASRAPGGAAATMMSDNIWSTLRMALSMMGESSLYAAA
DRRDLDTLLSYFCQREGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagctggtggagggggagtgtgggggagccaatcctctcatgaagctg
acgggtcatatgacccaggagggaggagcttggaggcacaggtcaacgcccactattccc
cctacacccattgaaatagcaacagaagaagagttggtgaatgagttcatgcagcaggcg
cctccacggccccctcacagcttcgacatgggccagttactggaggaaatgcagcagatt
gatcagcagagctacagacaggctccacagagagctccgggtgtggctgcgttggccctg
tctggtgattggacgtctgagtttctgtcgggagcagatgccgctgccgccgcctcatcg
gggcaggcgggacttggagacccggccgacgctgattggaccagagagtttatcaccgat
ggcacagatcccgggcgttgggcagaggagtatctggagcagtcagaggagaagctatgg
ctcggagacctgggagagagggagcaagactggacgaaagagtacctaccaggagacgaa
ctgaagcaaacagccaatgagctggtcgcaaaggtcaatgaccccaagttacagaacact
gagttcctgcggttcattaggcagattggcgagggcagtgtcacagtggaggacagagca
ggcaaacagcacacagatagagctcaggccaaggaggctcagaactgggcctccaacctc
aaccagttcctggaggagactgggggagggactttaccctcgacaacccaagagtgggat
cagaagattgccaaagctaaggctaaacaggcacatcaatgggcttctgtcgtcaagcag
gtctcagtggagtcagcagaatcatgggtagatgagtttgccactgcaggtccagatttc
cagcaagctaaagctgctgtggagagcgacttggacttctgggagaagctgcagcaggag
tgggaggagatggccaagagagatgcagaaagtcacccctggctctccgattttgaccag
atgctcagtagctcctacgacaaggggtaccagtttgaggaggacaacccgtacatgtcc
caccaggacccccttgctgagggggtgaggaggatggaggcaggggacatccccggggcc
gtgcgcctgtttgagagcgccgtacagagagaaccagacaaccagctggcatggcaatat
ctgggaacctgtcaggcagagaacgaacaagagtttgcagccatcagtgccctccgcaga
tgcatagagttgaagaaggacaacctgaccgctctgatggcactggccgtcagtttcacc
aacgaatcgctgcacaggcaggcctgtgagacccttcgcgactggctgaggcacaacccc
gcgtaccggccagtcctggagcagagtgaacgggagcgagagaaggacggcgggaccaga
gagcgggagagatttggctcactgctgccagattctttgtttacagaggtgcagtccctg
ttcctcagtgcggcgaactctgaccccgcccgcgtcgacccccagctacagtgtggcctg
ggagtcctcttcaatctgagcggggagtatgacaaggccgtggactgtttcacagcagcc
ctctctgtcacaccacaggactacctgctgtggaataaactgggcgctaccctggccaat
ggaagccgctcagaggaggctgttgccgcctacaggagggcgctggaactgcagccaggc
ttcatccgcagtcggtacaacctgggaatcagttgtgtcaacctaggagcccacagagag
gccgtggagcacttcctggaagccctgtccctgcagcggcaggcatcgggggagggcgag
acggtcagtgccagccgggccccagggggtgccgcggccaccatgatgtccgacaacatc
tggtccaccctgcgcatggccttaagcatgatgggagagagctcgctatacgcggcggcc
gaccggcgagacctcgacacgctgctctcctacttctgtcagagggagggggaatga
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