Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394308
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Entry
139394308 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139394308
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
U-box type E3
139394308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139394308
NCBI-ProteinID:
XP_070998447
LinkDB
All DBs
Position
Unknown
AA seq
2430 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLNITLADLKRQIMGRERLKAVDCGLQITNAQTKEEYKDD
EALISKNSSVIIRRIPIGGVKASSKMYNIERFSEQNHFPVQNLPVGSSKGDRSSEHCHFS
IGSSKGIDDHASSISLAQLSKTANLAEANASEDDKIRAMMSQSNHDYDPIHYVKKLTGPP
PANYTCYRCGKNGHHIRNCPTNGKEKGFEPPQRIKKSTGIPRSFMKEVDDPSIKGAMLTN
TGHYAIPTIDAEAYALGKKERPPFVPRDQSSSEEDEDPVPDELLCLLCKDLMTDAVVIPC
CGNSYCDDCIRTSLLESEEHVCPTCSQSNVSPDALIANKFLRQVKLSQAPPTQPWPLFSE
AVNNFKNETGYTKRMMTRVAQPPVVPTPPLQPQSRPQCPLQPIRSQQDPLMPRPPALDTP
PLAQQQVGPPLRVGNHNNSSHMAAGSSYNSTGPSPQHPTNHNNTLMLKEPESGGVQSVVV
SADPPLATAPMTKEYHVPVMSQPQSDSHSLQRTGPPPRLSEGPAHWDRYSPSGRGRNHSD
RAPPSQPPPTNVPPLLYNPPSIFSSPLPHPPGVIPPHYPPPHFPPGQQPPSSYSLPPPGY
PPTPGVTNPPWAPPNTQPPLTGKPIPSSSFLSKDEFYRQQKRLKDNSDCRYGNREKSKLD
EFTNDFAKELLEYRKIQKERRRSYSRSRSSYSSSSYSKSRSRSRSYSRSSSRSRSRSRSR
SRSRSRSYSRSSPYSRRHGRPRGYRSRSRGYRRSRSPPPFRDGGGAGRGRGRGRGYRSRS
RSPGQGGYRTHTPPPPSSRKPAAAGAPPEGERKYPGRTRERDWEPAVYERGPEHKDPYER
ERYREWEKEYREWYEKYFKNYNSHNPPPNNPPAYRGRPPLGFAPAPVAPPAGRDRDPYNP
PPPSDFYPSPRHRLDRGSSPFSRGRRRGEGFPPPPSHPSPRGRNQPMTYQEKCAEQFGTL
PLSRSANQDHQTPLKVAKGDRDPSSSVASPAVTVTSDLKEQKHRKRKKRKTEQGRGGGES
FSASDSTDDARKEEKEEKKKRTGSTPVGSSSHDDSTPVRDEPIDSDASDSVPDKADRWTR
DSKEEEVRRKSDRVYKRGPDSSVARKDSSSKRWKTVRETDRDQTGTYRDQTGTYRDQTGA
YRDQIGADRDQIGADRDQTGTDGLAYQKTSLTEPSAKRVKDESIPFQPDSCTSLQREMEL
QHPAPLASAPKLPPPKPHADQLDTVRINPDSFKPVRTDPDQFKPVRTDPDQFKPVRTDPD
QFKPVRTDPDQFKPVRTDPDQFKPVRTDPDQFNTVRTDPDQFKPVRTGPDQFKPFRTDLD
HSRPAKEEQRGKRDPGFRQDRGSGREDKPRREADIRVGREQERDPGKAPDTKSEKRRRRR
KEEEEEKRKTRKEERSMSDKEMEVPRIKSPGVELTETVQPCNLKRDVEEERERASVRPLM
ESGTKGGEPQRKIKTNREEGRRTGKLAGVAGTEAANQSSYIKGSVERSKAKRNRKVPVSD
GPGTTVDYTSPPGGSSPVCGDGSEGRAEQRKTVVKTLEEYTNDSSAPADGHIVLIQVPRS
KWEKEDYESEEEEGGGVRVKLRPLLTPSLPFPPGPHITVTTETEAVRRKERDCTFPKPEI
TMSPSSGRDREDGLQGGKHSGDPSEKDGETERKRDQLKEKEQERERDNERDRERAKERER
EREHSRASDKDMDRPRKIPSSSSSQRPERREREGERTGERGIDHISEKSSSQRPERERRE
RGGERTGERGSDHISEKSSSQRPERERRERGGERTGERGSDHISEKSSSQRPERERRERE
GERTVERGSNHISEKSSSQRPERERGGERTGERGSDHSSEKSSSSSSHSYSRDRKPFSSS
RDHKATSDPRAREHRDHKHKDHNDQNSSTVDRNTNSTDRRPLDDQETTREHRDRLDPKHK
DHRELGSASPVSKRAPPPSDPSSSSTQRSQGSSEPTGPSESSPGRDTTQDRYPSPQVSIS
VENQPGRGKAEGEEPRVERSSAGRQSQQASLGNLEKEMSGGKPHQHPASLLQPPRTDNRA
GVPRAVRERERKKERERQMQKMREKMEKERDEEGDKEVNREKERERGVDGEKERERGVDR
EKERERGVDREKERERGVDREKERERGVDREKERERGVDREKERERGVDREKERERGVDR
EKERERGVDREKERERGVGREKERERGVSREKERGRENPKVRPPPSAPSSRPPPSVPSSR
PPPSVPSSRSPPSVPSSRPPPSVPSSRTPPPVPSSRPPPSVPSSRTPPDLVRETDEAFEP
DYSEGEISEGEEEGERAVEGERAVEGERAVEGERVEGERAVEGERVEGERAVEGESGRSR
SSSASSVGSLGNKKDKKKKDRKEKKKQKKKKKKKDRKQRRQGSLDSEEGEITGLKHKHKK
KNKEKEDNEREEEEEVEERRGEDQMASVAL
NT seq
7293 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgtacattataaattctcatctaaactcaactacgacacggtcactttcgat
ggcctgaacatcactctggccgacctgaaaagacagatcatgggtcgagagagactcaaa
gctgtcgactgcggcctacaaatcaccaacgcacaaactaaagaagaatacaaagacgac
gaggccctgatatccaagaactcctctgtcatcatcagaagaatacccatcggaggagtc
aaggcttcaagcaagatgtataacattgagcgtttttcagaacagaatcacttccccgtt
cagaacctccccgtcggatcctccaaaggagatcgttcttcagaacactgtcacttttcc
attggatcctccaaaggaattgatgatcatgcttcatcaatatcactggcccaactttca
aagacggcgaacctggcggaggccaacgcatcggaggacgacaagatcagagccatgatg
tcacagtccaatcacgactacgaccccatacattatgtgaagaagttgaccggtccccct
ccagccaactacacctgttatcgctgtggcaagaacggacatcacatcaggaactgtcct
actaacgggaaggagaaagggtttgagccgccccagaggatcaagaagagtaccggcatc
ccccgttccttcatgaaggaagtggacgacccgtctataaagggagccatgttgaccaac
accggccactacgccatccctacgatagacgctgaggcctacgctttaggtaagaaggag
aggcctccgttcgtccccagggaccagtccagttccgaggaggacgaggatccagtccct
gatgagctcctctgtctgctctgtaaagacctgatgactgacgctgtggtcattccctgc
tgtggcaactcctactgcgacgactgtatccgtacgtctctgctggagtcagaggaacat
gtgtgtcccacctgtagccaatcgaatgtctcccctgatgctctcatagccaataagttc
ctgcgccaggtaaaactctctcaggctccgcctactcaaccctggcctttatttagtgag
gcggtaaataactttaagaatgagacaggttacaccaaacgcatgatgacgagagtagcc
cagccccccgtcgtccctacccctcctcttcagcctcagtcccgccctcagtgcccgctc
cagcctatcaggagccagcaggaccctcttatgccccgccctccagccttagacacgcca
ccattggctcagcagcaggttggcccgcccctcagagtcgggaaccataataactcctcc
cacatggctgctggctcctcctataactcaacgggcccctccccccagcacccaaccaat
cacaacaacacgcttatgctaaaagagccagagagtggaggagttcagtctgtggtggtc
tcagccgacccccctctagccactgcccccatgaccaaggaataccatgttccagtgatg
agccaaccccagtctgacagtcactccctgcagaggacaggtcctcctcccagactttct
gaaggaccagcccattgggacaggtacagcccctccggtcgtggcaggaaccatagcgac
cgcgcccctccctcccagcctccgcccaccaacgtgccaccccttctctacaaccctccc
tccattttctcctctcctcttccccatcccccaggtgtcatacccccccactacccccct
ccccacttccccccggggcaacagcccccctccagctactccctgccccctcctggatac
ccccctaccccaggagtcaccaaccccccctgggcgccccccaacacccagccccccctc
accgggaagccaatcccctcctcttccttcctgtccaaggatgagttctacagacaacag
aagaggctgaaggataactccgactgtcgctacggtaaccgggaaaagtccaagctggat
gagttcaccaacgactttgccaaggagctgctggagtacagaaagatccagaaggagagg
agacgctcttattccaggtctaggtcgtcctacagtagctcatcctactccaaatcccgt
tcccgttctcgttcgtactcccgttcctccagtcgatccagatcccgttccagatcccgt
tccagatcccgttccaggtcttactcccgctcctctccgtactcccgccgccacggacga
cctcgcggctaccgctcccgttcccgtggctaccgccgatcacgctcgccgccgcctttc
agggacggtggaggggcgggacgggggagaggacggggacgaggttaccggtcgcgctct
agatcacctggccaaggggggtaccggacccacactcctccacccccaagctcccggaag
cctgccgctgctggagcgccaccggagggtgagaggaagtacccgggccggacccgggag
agggattgggagccggcagtgtacgaacggggtccagagcacaaagacccgtacgagagg
gagaggtaccgggagtgggagaaggagtacagagaatggtatgagaaatacttcaaaaac
tacaactcccacaaccctcctcccaataacccccccgcctacaggggccgaccccccctt
ggtttcgcccccgcccctgtggcacccccagccggacgagacagagacccctacaaccct
cctccaccctcagacttctacccctccccccgacaccgcctggaccgtggatcctccccc
ttcagtcgagggaggaggcgaggtgagggctttccccctcccccctcacacccctccccc
aggggcaggaaccagccaatgacttaccaggagaagtgtgctgagcagtttggaactctg
ccgctgtcccggtcagccaatcaggatcatcagacgccactgaaggtcgcaaagggtgac
agagatccgtcgtcgagcgtcgcctctcccgcggtcactgtgacctccgacctgaaagag
cagaagcacaggaagaggaagaagaggaagactgagcaggggagagggggaggggagtcc
ttcagtgcttctgactctacggacgacgctcggaaagaagagaaggaggagaagaagaag
agaaccgggagtactcccgttggttcgtcaagccatgacgactccaccccagtacgggac
gagccaatagacagcgacgcctcagactcagtcccggacaaagctgataggtggaccagg
gacagtaaggaggaggaagtgaggagaaagagtgacagagtttataaacgcggaccggac
tccagcgtagcgaggaaagactcatcgtccaagagatggaagaccgttagagagacagac
cgggaccagaccggtacataccgggaccagaccggtacataccgggaccagaccggtgca
taccgggaccagatcggtgcagaccgggaccagatcggtgcagaccgggaccagaccggt
acagacggtttagcctaccagaagacttctctaacagaaccgtcagccaaacgggtcaaa
gatgaatctattcccttccaaccagactcttgcacctccctccagagagagatggaactc
caacaccctgcgcccctagcatcagctcccaaactacctcctcctaaaccccacgcagac
cagcttgacacagtcagaatcaacccagactcattcaaacctgtcagaactgacccagac
cagtttaaacctgtcagaactgacccagaccagtttaaacctgtcagaactgacccagac
cagtttaaacctgtcagaaccgacccagaccagtttaaacctgtcagaaccgacccagac
cagtttaaacctgtcagaaccgacccagaccagttcaacacagttagaaccgacccagac
cagtttaaaccggttagaaccggcccggatcagtttaaaccgttcagaaccgacctggac
cattccagaccagccaaggaggagcagagagggaagagagatccagggtttcggcaggac
aggggctcagggagagaggacaagcccaggagagaggctgacatcagggtgggtagagaa
caggagagagaccctggcaaagctccagacaccaagtctgagaagaggaggaggaggagg
aaggaggaggaggaggagaagaggaagacgagaaaggaggagaggagtatgtctgataag
gagatggaggtgccccgaatcaaatcacccggagtggagctcaccgagaccgtacaaccc
tgcaacctcaaacgtgacgtcgaggaggagagggagagggcttccgtaaggcctctgatg
gagagcgggacgaaaggaggagaacctcagaggaagattaagaccaacagagaagaaggg
aggaggaccggcaagcttgcgggcgtggccggaacagaggcagccaatcagagcagctat
atcaagggaagcgtggagaggagcaaagccaagaggaaccgtaaggtcccagtgtccgac
ggaccgggaaccaccgtggactacaccagtcccccagggggcagtagtcctgtgtgtggc
gatggatcagagggcagagcagagcagaggaagactgtcgttaaaacactggaggaatac
accaatgacagctcggcacctgctgacggtcatatagtactcatacaggtccctcgctcc
aagtgggagaaggaggactacgaatcagaggaagaggaaggaggaggggtcagggttaaa
ctccgccccctgctcaccccctccctgcctttcccccctggaccccacatcaccgtgacg
acggagacggaggcagtgcgaaggaaagagagggactgtacctttcccaagccagagata
actatgtccccctctagtggcagagacagagaagacggcctgcagggtggaaaacactcc
ggagacccttctgagaaagacggagagacggagagaaagagagatcagttaaaggaaaag
gagcaggagagggaaagggataacgaacgggacagagagcgggcgaaagagagagaaaga
gagagggaacacagccgtgcttctgacaaagatatggacagaccgagaaagattccctct
tcctcttcctctcagcggccggagaggagagagagagaaggagagaggactggggagaga
gggatcgaccacatcagtgagaagagctcctctcagcggccggagcgagagagaagagag
agaggaggagagaggactggggagagagggagcgaccacatcagtgagaagagctcctct
cagcggccggagcgagagaggagagagagaggaggagagaggactggggagagagggagc
gaccacatcagtgagaagagctcctctcagcggccggagcgagagaggagagagagagaa
ggagagaggactgtggagagagggagcaaccacatcagtgagaagagctcctctcagcgg
ccggagcgagagagaggaggagagaggactggggagagagggagcgaccacagcagcgaa
aagagctcctcttcctcctcacactcttactcacgagatcgtaaacctttttcttcttcc
agggaccacaaagcgacctctgaccccagagccagggagcacagagaccacaaacataaa
gaccacaacgaccagaactcctccaccgttgaccgtaacaccaactctactgaccgtaga
ccactagacgaccaggagaccaccagagaacacagagaccgcctcgaccccaaacacaaa
gaccacagagagctaggcagtgcctctcccgtctccaagagagccccacccccatcggac
ccctcctcctccagcacccagagatctcagggaagctctgagcccaccggacctagcgaa
agcagccctggcagggacacgacgcaggacagatacccctctcctcaggtctccatctcc
gtggagaaccagcccgggagggggaaggctgagggagaagagcccagagtggagcgctcc
tcagcggggagacagagccaacaggccagcctaggaaacctagagaaggagatgagtggt
ggaaagccccaccaacacccagcctcactcctacagccccccaggactgacaacagggca
ggggtgccccgagctgtcagagagagagagagaaagaaagagagagagaggcagatgcaa
aagatgagggagaagatggagaaggagagagatgaggagggagataaagaggtcaatagg
gagaaggagagagagagaggggtcgatggggagaaggagagagagagaggggtcgatagg
gagaaggagagagagagaggggtcgatagggagaaggagagagagagaggggtcgatagg
gagaaggagagagagagaggggtcgatagggagaaggagagagagagaggggtcgatagg
gagaaggagagagagagaggggtcgatagggagaaggagagagagagaggggtggatagg
gagaaggagagagagagaggggtggatagggagaaggagagagagaggggggtgggtagg
gagaaggagagagagagaggggtgagtagggagaaggagagagggagggagaaccctaaa
gtcagaccccctccctcggccccttcttccagacctcctccctcggtcccttcttccaga
cctcctccctcggtcccttcttccagatctcctccctcggtcccttcttccagacctcct
ccctcggtcccttcttccagaactcctcccccggtcccttcttccagacctcctccctcg
gttccttcttccagaactcctcctgacctggtcagagagactgatgaggccttcgaacct
gactacagcgagggagagatctcagagggggaggaggaaggagagagagcggtggaggga
gagagagcggtggagggagagagagcggtggagggagagagagtggagggagagagagcg
gtggagggagagagagtggagggagagagagcggtggagggagagagcggcagaagtcgt
agcagcagcgccagctctgtcggtagcctgggcaacaagaaagacaagaagaagaaagat
agaaaagagaagaagaaacagaagaagaagaagaagaagaaggatagaaagcagaggaga
caggggagcctggactctgaggagggagagatcacgggactgaaacacaaacacaagaag
aagaacaaggagaaagaggacaatgagagagaagaagaagaggaggtggaggagagaaga
ggagaagaccaaatggctagcgtagccttatga
DBGET
integrated database retrieval system
