KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394329
Entry
139394329         CDS       T10872                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like isoform X1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03250  Viral life cycle - HIV-1
ocla04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    139394329
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    139394329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139394329
   03110 Chaperones and folding catalysts [BR:ocla03110]
    139394329
Enzymes [BR:ocla01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     139394329
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     139394329
Chaperones and folding catalysts [BR:ocla03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    139394329
SSDB
Motif
Pfam: Rotamase Rotamase_3 WW Rotamase_2 WW_TCERG1 X8
Other DBs
NCBI-GeneID: 139394329
NCBI-ProteinID: XP_070998473
LinkDB
Position
Unknown
AA seq 160 aa
MADAEDEKLPSGWEKRMSRSSSRVYYFNHITNASQWERPVGSGDGSGEPDKVRCSHLLVK
HSQSRRPSSWREENITRSKEEALDLIQKYIEQMQSGEEEFEALASQFSDCSSARNGGDLG
LFGRGQMQKPFEDASFALKVGDMSGPVFTDSGVHVILRTG
NT seq 483 nt   +upstreamnt  +downstreamnt
atggcagacgccgaggacgagaagctaccgtccgggtgggaaaagcggatgagccgcagt
tccagtagagtgtactactttaaccacatcaccaatgccagccagtgggagcgtccggtg
gggtcaggtgatgggagtggcgagccagacaaggtgcgttgttcccacctcctggtgaag
cacagccaatcgcgtcgcccgtcctcctggagggaggagaacatcacacgctccaaggag
gaggccctcgacctcatacaaaagtacatagagcagatgcagtcaggagaggaggagttt
gaggctttggcctctcagttcagtgactgcagctccgcacgcaacggaggagacctggga
ctgttcggcagaggtcagatgcagaagccctttgaggatgcgtccttcgctctgaaggtg
ggagacatgagtggtccggtgttcaccgattctggagttcacgtcatccttcgcacggga
tag

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