Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394598
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Entry
139394598 CDS
T10872
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A-like
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04020
Calcium signaling pathway
ocla04080
Neuroactive ligand-receptor interaction
ocla04082
Neuroactive ligand signaling
Brite
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Glutamate (ionotropic)
139394598
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139394598
NCBI-ProteinID:
XP_070998801
LinkDB
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Position
Unknown
AA seq
1383 aa
AA seq
DB search
MMRTREDDKSTFFQFGASIQQEALLMLSIMEEYDWHIFSIVTSKFPGYQEFINVLKSTVD
NSFVGWDLQHIITLDAVEEDSKSQIMLKKVQSPVVLLYCSKDEGVFILEEARSLGLTGFG
YIWIVSSLTSGTTETVPEEFPSGMVSVSSEDWDYPLEARVRDGLGIITSAASAMLEEYGE
IPEARTSCYGTQPEKPSKVPPLALHKYMKNVTWEGRDLSFTEDGYQQNPKLVVIVLNKER
EWEKMGRLDNRSLTLKYHVWPRFNSFGDAETDDNHLSIVTLEEKPFVIVEDVERLTGTCM
RNSVPCRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKIN
NVWNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFL
EPFSATVWIMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWG
LVFNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKF
QNPYAYSPPFRFGTVPNGSTERNIRKNYPNMHEYLSKYHQTGVQDALVSLKTGKLDAFIY
DAAVLNYAAGRDEGCKLVTIGSGYIFATTGYGIALHKGSYWKRQVDLAILAIIGDGEMEE
LEAQWLTGICHHEKNEVMSSQLDIDNMAGVFYMLATAMGLSLITFISEHLFYWRLRYCFT
GVCTGTPGLLFSISRGIWSCIHGVHIDMKKKSELDFSPQANMLKLIKSAKQMTNMSNLST
SRINSPKRAAEFMHSAGPMIMDMMAEKGNFIYADNRSYAPKEVIYGDTGDLQAYLANRHK
DHLNNYIFQGGQHPLTLNESNPNSVEVAVSADAAQTNAKPRGLWKKSVDTMRQGPGVPGP
DMLSPDPRISMKTQRYLPEEAAHSDISDCSSRGGGGSYQDPENNMHLKNKDGLKKRQLPS
KYPRDCSEVELSYLKTKQGSGGGGGVGGQGQGQIYTIDSDRELNLNSDPLHYRESRGLAA
DDLDYPEIYSDHNDNYRKCQDQPIIHLNSSPLHHADVDLLPDSTYSKHYGVKDKSLSLSP
HETNDRSKQTHCRSCLSKFPASSSYTPGHYTPTNTASVAAAAAAAAARSPYNRCEACLHT
ANLYDISEDQLLQDALLTNQGMQHPDEMFGHYWPQTDGPHVQKRNRLRMSRQHSFDNIML
EKPKEIDLGRPARSVSLKEKDRCFLDDSPYANLFSVRQADKLLGSRSMLFNLEENKRSKS
LYPEHGSDNPFMASSLRDDTRLVHGRSSSDIYKQLGGGGGGGGLKTSQRNENNLRSSVKS
AASYCSRDGGRIPANDMYITEHVMPYVANKTSSYSAAPRGVLNSAQFSNRRVYKKIPSLE
SDV
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaccagagaggacgacaagtcaacgtttttccagtttggagcttccatccag
caggaggcgctgttgatgttgagcatcatggaggagtacgactggcacatcttttccata
gtcacctccaagttccccggataccaggagtttatcaacgtcctcaagagcaccgtggac
aacagttttgtaggctgggacctgcagcacatcataacattagatgctgtggaggaagac
agtaagagtcaaatcatgttgaagaaggtccaatccccggtggttctgttgtactgctct
aaagacgagggagtctttatcctggaggaggctcgctccctgggcctcaccgggttcgga
tacatctggatcgtctccagcctgacctccggcaccaccgagacggtacccgaggagttc
ccctcgggcatggtgtccgtctcctctgaggactgggactaccctctggaggcgcgggtg
agggacgggctgggcatcatcacgtccgctgcctccgccatgctggaggagtacggcgaa
atacctgaagcgaggacttcctgttacgggacacagccggagaagccttccaaggttcct
cctctcgctctgcacaagtatatgaagaatgtaacatgggaaggtagagacttgtcgttt
acagaagatggttaccagcagaaccccaagctggtcgtcatcgttctcaataaggaacga
gaatgggagaagatgggtcgtttggacaaccgtagcctgacgttgaagtaccacgtgtgg
ccgcgcttcaactcgttcggcgacgcggagacggatgacaaccatctgtccatcgtgact
ctggaggagaaacccttcgtcatcgtcgaagacgtggagaggctcactggaacctgtatg
aggaattctgttccctgtaggaagcacatcaaggacaacaccacagaggcgggcgggacc
tacattaaaaagtgctgtaaaggattctgcatcgacatcctgaagaagatcgcgaagtac
gtgaagttcacctacgatctctacctggttaccaacggtaaacatgggaagaagatcaac
aacgtgtggaacgggatggtgggagaggtggtctataagaaagctgtcatggccgtcggc
tctctgacgatcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaa
actggaataagcgtcatggtctcccgtagcaacggaaccgtctccccgtccgccttcctt
gagccattcagtgcgacggtgtggatcatgatgtttgtgatgctgttgttggtaacagcg
atggctgtgttcatgtttgaatacatcagccctctgggctttaacaggaacctggcacag
gggagagacccccacggcccatcgttcactatgggtaaggcggtgtggctgctgtggggt
ctggtgttcaacaactccgtcccggttcagaaccctaaaggcaccaccagtaagttcata
gtgtcggtgtgggccttcttcgccgtcatcttcctggcctcctacacagccaacctggct
gccttcatgatccaggaggagtttgtagaccaggtcacgggactgtctgacaacaagttc
cagaacccgtatgcgtactcccctccgttccgttttgggacggtccccaacggttcgacg
gagaggaacatcaggaagaattaccctaacatgcacgagtacctgtccaagtaccaccag
acaggggttcaggacgctctggtcagcctgaagacgggtaaactggatgccttcatctac
gatgctgctgtgttgaactatgcagcgggtcgagacgagggctgtaagctggtcaccatc
ggcagcgggtacatcttcgccaccaccggctacggcatcgctctgcataaagggtcctac
tggaaacgccaggtggacctggctatactggctattataggagacggtgagatggaggag
ctggaagctcagtggctaacggggatctgtcaccatgagaagaacgaggtgatgtccagt
cagctggacatcgacaacatggccggagtgttttacatgctggctaccgcaatgggactg
tctctcattaccttcatatcagagcatctcttctactggaggttgagatactgtttcact
ggagtctgtacgggaacaccaggactactgttctctataagcagggggatttggagttgt
atccacggcgtccacatcgacatgaaaaagaagtccgagctggattttagccctcaggct
aacatgctgaagctcatcaagtcagccaaacagatgaccaacatgtccaacctctctacg
tccaggatcaattcccccaagcgggcggctgagttcatgcactcggcggggcccatgatc
atggatatgatggctgagaaaggtaacttcatctacgccgacaatcgaagctacgcccct
aaagaggtgatctacggtgatacgggcgacctccaggcgtacctggccaaccgacacaaa
gaccacctgaacaactacatcttccaaggaggacagcaccctctgaccctcaacgagtca
aacccaaactccgtggaagtggcggtgagcgcggacgccgcccagaccaacgccaaaccc
agaggcctgtggaagaagtcggtggacacaatgcggcagggtccaggtgtccccggcccc
gacatgctgtccccagaccctcgcatctccatgaagacacagcgataccttccggaggaa
gcagctcactcagacatctctgactgctccagccgaggaggaggcggttcgtaccaggac
ccggaaaacaacatgcacctgaagaacaaggacggattaaaaaaaagacagttgccgtca
aaataccctagggactgcagcgaagtggagctgtcctacttaaagactaagcagggcagc
ggagggggtggaggagtgggaggacagggacaaggacagatctacaccatagactcagat
agagaactcaatctcaactccgatcctttacactaccgcgagagtcgaggcctggccgcc
gacgacctggactacccggagatctactctgaccacaacgacaactacaggaagtgtcag
gatcagccaatcatccacctcaactcgtccccgctgcaccacgccgacgtcgacctgctc
ccggactcgacttactccaaacactacggcgtgaaggataagagcttgtccctgtcgccc
cacgagaccaacgaccgttccaaacagacccactgccgctcctgtctgtccaagttccct
gccagtagcagctacaccccgggtcactacacgcccacaaacaccgcttctgtcgccgcc
gccgcagccgccgccgccgcccgctcgccctacaaccgctgcgaagcgtgcctccacact
gctaacctctacgacatcagcgaagaccagctgctccaggacgccctgctgaccaaccag
ggaatgcaacatccggacgagatgttcggccactactggcctcagacggacggtccgcac
gtccagaagagaaatcggctgcgtatgtcccgccaacactcgttcgacaacatcatgctg
gagaagcctaaagaaatagatctggggcgtccggctcgctccgtcagcctcaaagagaaa
gaccgctgcttcctggacgattctccctacgccaacctgttcagcgtccgccaggccgac
aagctgttgggctccaggtcgatgctgttcaacctggaggagaacaaacggagcaagtcg
ctgtaccccgaacacggctctgacaaccccttcatggcgtcttcgctgagggacgacacg
cgcctcgtccacggacgcagctcctccgacatttacaaacagctgggaggaggaggagga
ggaggagggctcaaaacatcgcaacgcaacgaaaacaatctgagatcctcggtcaaatcc
gccgcttcctactgctcccgggacggaggacggataccagccaatgacatgtacattaca
gagcatgtgatgccttatgtagccaataagacaagttcttactcagccgcaccgcgaggg
gtactaaactcagcccagttcagcaatagacgggtttataagaagatacccagtctggag
tcagacgtttaa
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