Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394625
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Entry
139394625 CDS
T10872
Name
(RefSeq) iroquois-class homeodomain protein irx-2-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139394625
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
139394625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
139394625
NCBI-ProteinID:
XP_070998828
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSDELARSSSGSAFSPYPGSAAAFTASAS
GFSSPMPYSTDPATGFPSYMSSPYDAQGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDA
TATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNK
SEDEDDGDGERNDDRLEKNLDNSETSAEDEGISLQVDTLTDHSCSAESDGDKVSCRIGDL
VCESGSDTKDKCEDDDDDHELENDERHLSLSPKPVTSSPLTGLEASVLNHHHRENNNKSC
LDSRISGRHNQAVKPKLWSLAEIATSDPKQQQHHPGQTCPSLGLLTSTSSTPSPAVPGAV
YSASSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILQYNSANDGLKQTAAEVSTMHKHTT
DSLLKTNANHIEQFRPSHLYSKKGESCILLLRQDAWPAALQLFSSETGPKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacccccagggttacctctaccagccgccgggctccctggctctctactcctgc
ccggcttacggggcttcagccctggctgccccgaggagcgacgagctggccaggtcgtcc
agtggatcagcctttagtccttaccccggatcagctgctgccttcacggcttcagccagc
ggcttctccagcccaatgccatactccacagaccctgccacgggattcccttcctacatg
agctctccttacgacgcgcagggcatggccggggcgatcagctaccacccctacggtagc
ccgggatacccctaccagctcaacgacccggcctaccgcaagaacgcgacccgagacgcc
accgccacgctgaaggcctggctacaggagcacaggaagaacccctaccccaccaaggga
gagaagatcatgttggccatcattactaagatgaccctgacgcaggtgtccacctggttc
gccaacgccaggaggaggttgaagaaggagaacaagatgacgtgggctccccggaataag
agtgaggatgaggacgatggagacggagagaggaatgatgaccgcttggagaaaaatctt
gacaacagcgagacgtccgcggaggatgaaggtatcagtttgcaggttgatacccttaca
gaccattcttgttcagcggagtctgatggggataaggtgagctgtcgaatcggggacctg
gtctgtgagtctgggtcagatactaaggacaaatgtgaggatgatgatgatgatcacgaa
ctggagaatgatgaacgacacctaagcctgtcacctaaacctgtgacatcatcaccacta
acagggcttgaggcctcggtcttaaaccatcaccaccgggaaaacaacaacaaatcatgt
cttgacagccgaatctcaggtcgtcacaatcaagccgtcaaacccaaactgtggtcgtta
gcggagatcgctacttcagacccgaagcagcagcagcatcacccggggcagacttgtcca
tccctcggtcttctaacctccacctcctccaccccctccccggccgtccctggcgctgtg
tactccgcctcttccatcctaggacgacccatctactacacgtctccgttttacagtaat
tacacaaactatggcaacttcagcccgctgcagggtcaagggattctgcaatataactct
gctaacgacggactcaaacagactgctgctgaggtcagcaccatgcataaacacaccact
gactctctgcttaaaacgaacgctaaccacattgaacagttcagaccctcacatttatac
tctaagaaaggggagagctgcatcttgctcctcagacaagacgcctggcctgcagcacta
cagctgttctcctcagagacaggcccgaaggattaa
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