Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139394635
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Entry
139394635 CDS
T10872
Name
(RefSeq) nuclear pore complex protein Nup93-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139394635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139394635
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139394635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
139394635
NCBI-ProteinID:
XP_070998863
LinkDB
All DBs
Position
1:complement(26346217..26380652)
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AA seq
820 aa
AA seq
DB search
MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSDAGTPGRSALDS
VEVAYGRQIYIFNEKIVNGHVQPNLGDLCASVVDSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVDMQMAFVTQALQFLENSYKNYTMVTVFGNLLQAQLGGVPGTYQLVCSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDDDGSSAPQDRLTLAQLQKQLLEDYGESHFSAIQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELGLLLKSSGQSAQLLSQEAGDPPMVQRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNSQGENMFMCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVKLYELTKNPDRVLELMNRLLSPVIAQVGSTQSN
KERLKNTAVAIAERYRTQGVAGEKSVDSTFYLLLDLMTFFDEYHVGHIDQAYDVMERLKL
VPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFMQYKRLKGATAGAPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagagctcctgcagcaggcggagcagcttgcagcggaaact
gaggctgtgtctgagcttccccatgttgagaggaaccttcaggagatccagcaggctgga
gagaggctacgttcccgcaccttaacccgaacgtcgcaagacgctgctgacgtaaaagcc
tctatcctcctgggttccagaggcctggacatattccacatctcccagcgtctggagagc
ttgagtgctgccaccacctttgaacctttggagccagtgaaagacactgacatccagggc
tttctgaagaatgagagggacaatgcgctgctctctgcaatcgaggagtcacgtcgcagg
acgttcctcctggcagaggagtaccaccgtgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccttgctgggagcaggggaagatgctctggacttcagccaa
gacgtagagcccagctttgtgagtgacgcagggactcctgggcggagtgctcttgacagc
gtggaggtagcctatggacgacagatctacatcttcaatgagaagatagtgaacgggcac
gtccagcccaacctgggagacctctgtgcctcagtggtagacagcctggatgacaagaac
gtgtcagatatgtggctgatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacgtctgtggacatgcagatggctttcgtcacgcaggccctg
cagttcctggagaacagctacaagaactacaccatggtaacggtgtttgggaacctgctc
caggcccagctgggcggagtccctggcacctatcagctggtgtgcagcttcctcaacatc
aagctaccagggcctctgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgcctgcgctgtggggacctgggggctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggaatatatgaacagccct
gacagacgcttggcccctgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagggccgtctactgcctcattgggaagtgtgacatc
gcagacaaccatggagaggtggccgacaaaaccgaggactacctgtggctcaagctcaac
caggtgtgcttcgatgacgacggcagcagtgctcctcaggacagactgacactggcccag
ctacagaaacagcttctagaggactacggagagtcccacttctcagccatccagcagccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgctgtggccttcctg
ttccgggtggagcgtctacgcagtcatgctgttcacgtggctctggttctctacgagcta
gggctgctgctcaagtcatctggacagagtgcacaactgttgagtcaggaggctggggac
ccccctatggtccaacggctcaacttcatccgtctcctcatgctctacacacgcaagttt
gagtccacagacccccgggaagcgctacagtacttctacttcctacggaatgaaaaaaac
agccaaggagaaaacatgtttatgtgctgtgttagcgagctggtgattgagagtcgagag
tttgacatgcttctgggaagactggaaaaagatggcagcaggaagcctggagtgattgat
aaatttgccggagacacgcgagcaattatcacaaaagtggcgctggaggcagagaacaag
ggcctgtttgaggaagcagtcaaactgtatgagctgaccaagaatccagacagggtcctg
gagctgatgaacaggctgctgagtcctgttattgcccaagtgggctccacccagtccaat
aaggagagactgaagaacactgctgttgccatcgctgagcggtaccggacccagggtgtt
gctggagagaagtctgtggacagcaccttctacctgctgctggacctcatgaccttcttt
gatgagtaccatgttggtcacatagaccaagcctacgatgttatggagagactgaagctg
gtccctctgagtcaggacagtgtggaggagagggtcgctgcattccgtaatttcagtgat
gaggtcaggcataatttgtcggaggttctcctggccaccatgaacatcctgttcatgcag
tacaaacgtctgaagggcgccacagcaggagcccctggtcgaccacagagatccatggag
gacagagactcgcaactgcgcagccaggctcgagcactgatcacgtttgctgggattatc
ccataccgaatggcaggcgacaccaatgcccggctggtgcagatggaggtcctaatgaac
tga
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