KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395195
Entry
139395195         CDS       T10872                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    139395195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocla03021]
    139395195
   03036 Chromosome and associated proteins [BR:ocla03036]
    139395195
Transcription machinery [BR:ocla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     139395195
   Coactivators
    SAGA/TFTC/STAGA complex
     139395195
Chromosome and associated proteins [BR:ocla03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     139395195
    STAGA complex
     139395195
    TFTC complex
     139395195
    SAGA complex
     139395195
    SLIK complex
     139395195
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Pheromone
Other DBs
NCBI-GeneID: 139395195
NCBI-ProteinID: XP_070998957
LinkDB
Position
3:complement(39726891..39732449)
AA seq 162 aa
MTQYQPQSNRSNLFTVKAEASSTPPLSTSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttattcaccgtgaaagccgaggcc
tcctcaacaccacctctctccaccagcatggccaatagcagcgccgccgctccagggaag
gtgatgggcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgactttattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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