Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395213
Help
Entry
139395213 CDS
T10872
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139395213
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139395213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139395213
NCBI-ProteinID:
XP_070998959
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MKRGRRVFGGNSRRKSTRPTRQQLQEMPLEVEAGSEGKGCIPSILDFRVHSHLGSARRRE
INAVTNSMFSATRKRFVEGVESDYPDDTVYYGQTSMFPHPSDKDMLASPSPSSSGQLSQL
GASLYGPQSALGFPMRGMSNTAQLNRSLPQGNQLPSHVTPASGVAPTMSLHTPPSPSRGI
LPMNTRNMMNTPQQVGRQEVMVGGMPSGGRTNSLGSSGLGSPNRASPSIICMPKQQQSRQ
PFTINSMSGFGMNRNPSFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGGGN
PTPLLNPLAGRAPYVGMVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTANNDDSITNLNS
SGKTSSSTDGPKFPGDKSSTAQNNNQSKKGIQVLPDGRVTNIPGGMVTDQFGMIGLLTFI
RAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTN
IHIRDKLAAIKLSRYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPG
MEPTLKTNAYERGTYYFFDCLNWRKVAKEFHLEYEKLEERPHVPSTFNYNPAQQAF
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagggagacgagtcttcggtggcaacagtcgcagaaagagcacccgcccaaca
cggcaacagctacaggagatgcctttggaggttgaggcagggtcagagggtaaaggctgt
atacccagcatcctcgattttagagtacacagccatcttggatctgcgaggagaagagaa
attaatgcggtgactaacagcatgtttagtgctaccagaaagaggtttgtagaaggggtg
gagagtgactaccccgacgacactgtgtattatggccagacatccatgttccctcatcca
tcagacaaagacatgctggcatctccatccccatcgtcgtcaggtcaattgtcgcagctt
ggtgccagtttatacgggccacaaagtgccctagggttccctatgaggggcatgagcaac
acggctcagttgaatcgcagcttaccacagggcaaccagctaccgagccacgttacccct
gcctctggagtcgcccccacaatgtccctccatactcctccctcgccaagcaggggcatc
ctgcccatgaacacgcggaacatgatgaacacccctcagcaggtggggcgccaggaggtc
atggtggggggcatgcctagtgggggcaggaccaacagcctgggcagctcgggcctgggc
agccccaaccgtgcctctcccagcatcatctgcatgcccaagcaacagcagtcacggcaa
cctttcaccatcaacagtatgtcggggtttggaatgaaccggaatccatcgttcgggatg
aacaactcgttatccagcaacatcttcaacggaacagacggaagtgaaaacgtgacaggt
ctggacttgtcagacttcccagcgttagcagaccggagtcggagggaaggaggtgggaac
cctactcctctcctcaacccactggctgggagggctccttatgttggaatggtcaccaaa
ccctcaaacgaacagtcccaagacttctccatccataacgaggacttccctgcgctgcct
ggtcccaactacaaggaccccacggcgaacaacgacgacagcataacgaatctaaactct
tcaggtaagacttccagcagcacagacgggcccaagttccccggggacaagagctcaaca
gcccagaacaacaaccagtcgaagaaaggcatacaggtgttaccggacggtcgcgtgacg
aacattcccgggggcatggtaacagaccagtttgggatgattggcttgttaacgttcatc
agggcagcggagacggaccctggcatggtgcacctagcactgggcagtgacctgacaaca
ctaggactcaacctcaactcgccagaaaacctgtaccccaagtttgcgtctccctgggcg
tcagcaccgtgtcgaccccaggacatcgacttccatgttccatctgagtatttaaccaac
attcacataagggacaagcttgctgcaatcaaactgtctcggtatggggaggacctgctg
ttctatctttactacatgaacggaggagacctccttcagctgctggcagcagtagagctc
ttcaaccgggactggcggtaccacaaggaggagcgtgtgtggatcacgcgggcgccgggc
atggagcccactctgaagaccaacgcctatgagagaggcacctactacttctttgattgt
cttaactggaggaaagtagccaaggagtttcatctggaatacgagaagctagaggagaga
ccccacgtgccatccaccttcaactacaacccagcccagcaagccttctga
DBGET
integrated database retrieval system
