Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395248
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Entry
139395248 CDS
T10872
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139395248
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ocla01002
]
139395248
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139395248
03036 Chromosome and associated proteins [BR:
ocla03036
]
139395248
Peptidases and inhibitors [BR:
ocla01002
]
Metallo peptidases
Family M1
139395248
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139395248
Coactivators
SAGA/TFTC/STAGA complex
139395248
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139395248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
IL2
Motif
Other DBs
NCBI-GeneID:
139395248
NCBI-ProteinID:
XP_070998999
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MHEVKMNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLN
SKQCRIYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGEL
VIKVPSELWKQGDEMNVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNST
RFWFPCVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTFHYVLPIPTAASN
ISLSVGPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKT
VFVDEAYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRQCLAQALAQQFFGCFISRMSWAD
EWVLKGISGYIYGLYLKKTFGVNQYRHWIKEELDKMVEYELKMGGVLLHPTFGGGKDKDN
PTPHLHFSIKHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
KYQSHMWSQMLVSTHSFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLEL
EIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
MNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESI
LALEKFPTPASRLALTDILEQDQCFYKVRQGACFCLAKIANSMMSTWTGPPAMKSLFTRM
FCCKSCPNIVKTNTFISFQSYFLQKTMPVAMAQLRDIQNLCPKDVLNFILDLIKYNDNRK
NKFSDNYYRAELIDALTNSLTPAISISNEVRTVDNLNGDVRLILEEITRSLNMEKLLPSY
RNTITVSCLRAIRMLQKNGHIPSDPSLFKSYAEYGHFVDVRVAALEAVVDYTRVDRSSVE
LQWLLNMVQNDPAHYIRHKILSMLGKNPPFTKAAESPLCNEALVDQLWKLMNSGTSHDWR
LRCDAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPEQGPDTTEMTGNTIG
VHIPVMGFTSSLDEGLITMETVSSVSMSSGVAPPPQGLKRKLDSVVGPLGSSSPEPGQVL
QEEDTSKKFKIRVRISSAVGRHFYCSGLSLQALPNSVCVCVCVLMCVCTCSCVNVSMC
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtcaagatgaacaggaagaaggacaagggatttgagagcccgcggcctttt
aaattgactcaccaggttgtctgcatcaacaacatcaacttccaaagaaagtctgtgatt
ggctttgtggagctgaccatcttcccaactgtggtcaacctgaaccggatcaaactcaac
agcaagcagtgcaggatctacagggtccgggtcaatgacctcgaagcaccattcatttac
aatgaccctactctagaggtctgccaccacgagtccaagcagaggaacctgaactatttc
tccagtgcctacacagcagcagtcagtgctgtggacccagatgcaggacacggcgagctg
gtcatcaaagtcccctcggagctgtggaagcaaggagacgagatgaatgtgctgaaggtg
tacatagagttctctctggaccagcctaaaggaggccttcactttgtggtgcctgacgta
gaggggagcatggctgagagaggagcacacgtcttctccttcggataccagaactccaca
aggttctggttcccctgtgtggactcatactctgagctgtgcacctggaagctggagttc
acagtggatgcctctatggtagctgtgtcctgtggggacttggtagagactgtctatacc
catgacatgaggaagaagaccttccactacgtcctccccatccccaccgccgcctccaac
atctcactgtctgtcgggccctttgagatcctggtcgacccctacatgcatgaggtcacc
cacttctgtttgccccagctcctgcccctgttgaaacactccatgtcctacctgcatgag
atctttgagttctacgaggagatcctgacctgtcgctatccttactcctgcttcaagact
gtgtttgtggacgaggcctacgtccaggtgtcttcctacgcgtcgatgagcatcttcagt
actaatctgctccacagtgccatgatcatagaccagacccccctgaccagacagtgttta
gctcaggccctggcccagcagttctttggctgcttcatctccaggatgtcctgggctgat
gagtgggtgctgaaggggatctctggctacatctatggtctgtacctgaagaagaccttt
ggagtgaaccagtaccgccattggatcaaagaggaactggacaagatggtggagtacgag
ctgaagatgggaggagttctcttacacccgaccttcggcggaggaaaagacaaggacaac
cctacccctcacctccacttctccatcaagcaccctcacaccctgtcctggaagtactat
aagatgttccagtgtaaagcccacctggtcatgaggctcattgagaacaggatcagcatg
gagttcatgctgcaggtgttcaacaagttactaagcctggctagtacagcgtcctcgcag
aagtaccagtcacacatgtggagtcagatgctggtatccacccacagcttcctcaagtcc
atctccaacgtgtcggggaaggacataggacccctcatcaagcagtgggtagaccagagt
gcggtggtgaagttctttggcagttttgccttcaacaggaaacggaacgttctagaactg
gagattcgacaggactacacctcctctggaacacagaaatatgtgggacccatcaaggtg
acagtccaggagctggatgggtccttcaaccacacgctacagatagaagagaacagcctg
aaacacgacatcccctgccactccaagagcagacgaaacaagaagaagaagatccctttg
atgaacggggaggaggttgacatggacctgtctgctatggatgcggattctcccttgctg
tggatccggatcgatccggacatgtccatcctgcgtaaggtggagtttgagcaggcagac
ttcatgtggcagtaccagctcaggtacgagcgtgacgtcgtggcccaggaggagtctatt
ttagccctggagaagttccccacgccggcctcccgtctggccctcactgacatcctggaa
caggaccagtgtttctacaaggtccgccagggcgcctgcttctgcctcgccaagatcgcc
aactccatgatgagcacctggaccggtcctccagccatgaagtctctgttcaccagaatg
ttctgctgtaagagctgtccaaacatcgtcaagaccaacaccttcatcagcttccagagc
tacttcctacagaagaccatgcctgtagccatggctcagctcagagacatccagaacctc
tgtcccaaagacgtcctcaacttcatcctggacctcatcaagtacaacgacaacaggaag
aacaagttctctgacaactactaccgtgccgagctgattgacgccctcaccaactccctg
accccggccatcagcatcagtaacgaggtgcgcaccgtggacaacctcaacggagacgta
cgtctcatcctggaggagatcacacggtctcttaacatggagaaactactgcccagctac
cgcaacaccatcactgtcagttgtctcagagctatccggatgctccagaagaatggtcat
atccccagtgatccctctctgtttaaatcctatgcagaatacggacactttgtggatgtt
cgtgttgcagcgctggaagctgtggtggactacacaagagttgacaggagctccgtggaa
ctgcagtggctgctcaacatggtccagaatgacccggctcactacatcagacacaagatc
ctaagcatgctgggtaaaaaccctcccttcaccaaagcagccgagtctccactctgcaac
gaggctctggtcgaccagctgtggaaactcatgaactcaggtacgtctcatgactggcgg
ttgcggtgtgacgcggtgaatctctactacactctgtttggtctgacgcgtccctcctgc
ctgcccctgcccgagctgggcctggtactcaacctcaaggagaagaaggccgtgctcaac
cccactatcaagcctgaacagggaccagacaccacagagatgactggcaacaccataggc
gttcatatccctgtcatgggcttcactagcagtctggatgagggcctgatcaccatggag
acagtgtccagcgtgtctatgtccagtggtgtggccccgccccctcagggtctgaagagg
aagttggacagtgtcgttggcccgctgggctcgtcctcaccggagccaggccaggtcctg
caggaagaggacaccagtaaaaaattcaagatcagagtaaggatctcgagcgccgtgggg
aggcacttttactgttctgggctttcactacaggctttacccaatagtgtgtgtgtgtgt
gtgtgtgtgttaatgtgtgtgtgcacgtgttcatgtgttaatgtgtccatgtgttag
DBGET
integrated database retrieval system
