Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395362
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Entry
139395362 CDS
T10872
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139395362
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139395362
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139395362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-C3HC4
zf-CCCH_9
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
139395362
NCBI-ProteinID:
XP_070999031
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MAEAAATAAPAIPGAWTKHVTCRYFMHGLCKEGTNCRYSHDLNTSQPAAVMICKFFQKGN
CVFGDRCRFEHSKEDVPGPKPSLPPPASACALLTPTSLAASAPAPVPSGSAGGQSADGPE
NPHGSGAGDWVMAAEFVPGQPYYCGRDPVKSDGSGMSPLEREKDPAGDDKELRKTLCPYA
AMGECRYGLNCAYLHGDVCDMCGLQVLHPSNDAQRSEHTKACIEAHEKDMELSFAIQRSK
DMQCGVCMEVVFDKANPSERRFGILSNCCHCYCLKCIRKWRSAKTFESKIIKSCPECRIT
SNFVIPSEYWVEDKEDKQKLIQKYKDGMGTKACRYFDQGRGTCPFGSNCFYKHAFPDGRL
EEPQRRPAGCNGRNRNWRRTPLWDLFEERENSSDSLDNEDEEMVTFELSEMLLMLLAAGT
DDDVTDSEDEWDLFHEELDDIYEIYL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcagctacagcggctccagcaataccaggagcctggaccaaacacgtc
acctgcaggtatttcatgcatgggctttgcaaagaaggcaccaactgtcgatattcccat
gatctcaacaccagtcaaccagctgcagttatgatttgcaagttctttcagaaaggaaac
tgtgtgttcggcgaccggtgcaggtttgaacactctaaagaagacgtgcctgggcccaag
ccgtcgctgccaccccctgcctccgcctgcgcccttctcactcctacgtccctcgccgcc
agcgctccagcccccgttcccagtggatcggcgggtggtcagtcggcagacggcccagag
aaccctcatggatcaggcgcaggggactgggttatggcggcagagtttgtaccaggccag
ccgtactattgtggaagggacccggtgaagtctgacgggtcggggatgagtcctctggag
cgagagaaagacccggcgggagacgataaggagttgaggaagactctgtgtccctacgcc
gccatgggggagtgtcgctacggacttaactgtgcctatctccacggcgacgtgtgtgac
atgtgcggtctgcaggtgctccacccctccaacgacgcacagcgatcagaacacaccaag
gcttgcatcgaggcccatgagaaggacatggagctgtcgtttgccatccagcgcagtaag
gacatgcagtgtggcgtgtgtatggaggtggtgtttgacaaggccaaccccagtgagaga
cgcttcggcatcctgtccaactgctgccactgctactgcctcaagtgcatccgcaagtgg
aggagcgccaagacgttcgagagcaagatcatcaagtcctgtccagagtgtcggataacg
tccaacttcgtcatccccagtgagtactgggtggaggacaaggaagacaagcagaaactg
atacagaaatacaaggatggcatggggactaaagcctgtcgttacttcgaccagggtcgg
ggcacctgcccgtttggctccaactgcttctacaaacacgccttccctgacgggcggctg
gaggagcctcagaggagaccagcagggtgcaacggcaggaacaggaactggaggaggaca
cccctgtgggacctgtttgaagagcgggagaacagcagcgactctttggacaacgaggac
gaggagatggtgacctttgaactgagcgagatgctcctcatgctcctcgccgcgggaacc
gacgacgacgtcacggactcggaggacgaatgggacttgtttcacgaagagctggacgat
atctacgagatttacctatag
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