Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139395909
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Entry
139395909 CDS
T10872
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
Motif
Other DBs
NCBI-GeneID:
139395909
NCBI-ProteinID:
XP_070999321
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MDTQLSHSQVIKELNKCREENSMRLDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPS
EVGCLSGLVTLALSENSLTSLPESLDSLKKLRMLDLRHNKLREIPAVVYRVTSLTTLYLR
FNRITAVERDIRNLAKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNC
TQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEELNLENNNIS
VLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKV
LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEVLILSNNLLKKL
PHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLG
LGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQI
VAGGPSFIIQFLKMQGPYRAMV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggacacacaactttcccattcccaggtgatcaaagagctcaacaagtgccgtgaggag
aactccatgcgtctggacctgtccaagcgttccatccacatgttacccacctccatcaag
gaactcacccagctggcagagctctacctgtacagcaacaagctccagagcctcccctca
gaagtgggctgcctgtctggcctggtcaccttagccctgagtgagaactctctaaccagc
ctcccagagtccttggactccctgaaaaagttgaggatgctggacctgaggcataacaaa
ctgagggagataccggcggtggtttatcgggtgacgtcgctgaccacactgtacctgagg
ttcaaccggatcacggcggtggagagggacatccggaacctggcgaagttgaccatgctc
agcatccgtgagaacaagatcaaacagctgcctgccgagataggcgagctctgtaacctc
atcaccctggacgtagcccataaccagctggaacatctacccaaggagatcggcaactgc
acccagatcaccaacctggacctacagcacaacgagctactggacctaccagaaactata
ggtaacttggcaagcataaaccgcttgggtctgcggtacaaccggttgtcagccatcccc
agatcgctagccaagtgcagagaactggaagagctcaacctagaaaacaacaacatctcc
gtgttaccagaaggtctcctgtctagtctggtgaatctgaccagtctaaccctggcgagg
aactgtttccagtcctacccggtgggaggaccctcccagttctccaccatctactctctc
aacatggagcacaaccgcatcaacaagatcccctttggaatcttctccagggccaaagtc
ctcagcaaactcaacatgaaggacaaccagttgacgtctctgcctctagactttggcacg
tggaccagtatggtggagctcaacctggccaccaatcagttgacaaagatccctgaggac
atctgcggtctcgtttcgcttgaggtcttgatattgtccaacaatcttctcaagaagttg
ccacatggtattggcaacctgaggaaactacgggagctcgacttggaggagaacaagctg
gaatcgctcccgaatgaaatcgcttacctgaaagatttacagaaactagtgttgaccaat
aatcagctgaccacgttgccccgtgggatcggtcacctcaccaacctgacccacctgggt
ctgggagagaacctgctgcagcacctgccagaggagatcggtacactggagaacttggag
gagctgtacctcaatgacaaccccaacctgcacagcctcccgtttgagctggccctgtgc
agcaagctgtccatcatgagcatcgagaactgtcctctcagccatctgcccccgcagatc
gtcgccgggggcccctccttcattatccagttcctcaagatgcaggggccctaccgggcc
atggtctga
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