Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396212
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Entry
139396212 CDS
T10872
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139396212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139396212
Transporters [BR:
ocla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
139396212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_22
RsgA_GTPase
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
139396212
NCBI-ProteinID:
XP_070999449
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
LFIIFLSFTLSISFPPSLLSSSYPLQVSYHLRFSFSPRNAPAKEKSELNINNDFDWHTLN
LFPLFQLPGPREQYDLQGGTPGYFREGFLAVQHAVNQAIMRSYNSTGAAWLLSHTRVVLR
RFPFPPFIYDVFILAIQNQLPLLLVLSLTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWL
HWTAWFLMFFLFLAISMFFVTLLFCIKVSPNGAVLTYSDPTLVFVFLLVFAVATINFSFM
ISAFFSRANVAAAAGGFIYFLSYLPYVFLWPRYDLLSHAQKVSACLISNVAMAMGAQLLG
MFEGKGTGIQWCNLFESVTVDDDFSLAQVLGLLLLDALLYGLVAWYVEAVFPGEYGVPLP
CYFFLLPSYWCSSPRMAMVKEEEDVEKALKGEFIEEEPAGLVSGVKIKHLNKEFKVGNKT
RQAVKDLTVNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMALIR
HSLGLCPQHDVLFDNLTVQEHLLFYTQLKGYSQEKIPAEVDRIIRILNLEDKRHSHSKTL
SGGMKRKLSIGIGLIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMDE
ADLLGDRIVIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEITRLVHMYVPNAT
LESSAGAELSYILPKESTNRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVDS
SLDIQAIQLPPLQYQHERRSHDWTMDDTSSYSGMTDVTDFTDSGTLISEDCSNIKLNTGA
RLYMQQFYAMFLKRALYSWRNWKVIVAQFLVPLVFTVLALVVAKTFPGRHDSPQLRLALG
RYGPTTVPVALEPGKGPLAIALAQVYSSQLAAQQAQDVNIRDFTEYVLTKTEEEGGAFNE
RCVVGASFRGGTEKFAEVTAYFNNQGYHTAATALMMVDNTLFKMLAGPNASIMTGNMPMP
RNVSESAQSQLTEGQTGFAIAINLMYGMASLSSTFALLLVTERSLKSKHVQQVSGVYLSN
FWFSALLWDLVNFFLPCMLMLVVFRAFGVKAFVADNHLVDVLLLLLLYGWAVIPLMYLLS
FLFSTAATAYTRLTIFNIISGTATFLTVTIMTIPELYLQDLSRNLDKVFLLFPNYCLGMS
FSQFYQNYQFITFCTPNPVTMAFCRAFNITYQENYFSMSEPGVGRFLVALSLQGVVFITL
LFIIEMQCVKTLRRFLTHLASRRKQLPLMGDAALLPEDRDVAEERKRVLECQPIVESMVG
SPLILQDLSKVYSSGETVLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTSG
DAYIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVENV
LRSLLLEPHADKLCRSYSGGNKRKLSAAVALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVD
KEVEDSDLQLFKDFIESTFPGSLLTDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYNID
DYAVSQISLEQVFLSFAQFQHCSRK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
ttgttcataatctttctctcttttactctctctatttctttccctccctccctcctctcc
tcctcctatcccctacaggtcagctaccacctgcggttcagctttagtccccgtaatgcc
ccggccaaggagaagtctgagctgaacatcaacaatgactttgactggcacaccctcaac
ttgttccccctcttccaactgcccgggcccagggagcagtacgacctccaggggggcacg
cctggttatttccgcgagggcttcctggcagtgcagcatgcggtcaaccaggccatcatg
cgttcctataacagcacaggagcagcctggctcctctcccacacccgggtggtcctccgc
cgattccccttcccgccgttcatctacgacgtgttcatcctggccatccagaaccagctg
cccctcctcctggtgctgagcctcacctatacctctctgaacatcgtgagggccgtggtg
caggagaaggagaggaagctcaaggagtacatgcggatgatgggcctcagtaactggctg
cactggacggcctggttcctcatgttcttcctcttcctcgccatctccatgttcttcgtc
acgctgctcttctgcatcaaggtgagccctaatggagctgtgttgacctatagtgacccc
accctggtctttgtcttcctgcttgtctttgccgtggcaaccatcaacttcagcttcatg
atcagtgccttcttctcaagagccaatgtggctgcggcggcgggcggcttcatctacttc
ctgtcctacctgccgtacgtgttcctatggcctcgctacgacctccttagccacgcccag
aaggtgtctgcctgcctcatctccaatgtggccatggccatgggagcgcagctactaggc
atgtttgagggcaaaggtacggggatccagtggtgtaacctgtttgagtcggtgacggtg
gacgatgacttctccctggcccaggtgctggggctgctgctgctggatgccctgctctat
ggcctggtggcctggtacgtggaggctgtgttcccaggggagtacggagtccctctgccc
tgctacttcttcctactgccgtcctactggtgcagcagcccccgcatggccatggtgaag
gaagaggaagacgtggagaaggctctgaagggagagttcatcgaggaggagccagccgga
ctggtctcaggagtcaagatcaaacacctgaacaaggagttcaaagtgggtaacaagacg
cggcaggctgtcaaggatctgacagtgaacatgttcgagggccagatcacagttctgctg
gggcacaacggagccgggaagaccaccacactgtccatgctgacaggtctttttcctccc
agcagtggcagggcctacattaacggctatgacatctgtcaggacatggctctgattcgc
cacagcctgggcctgtgtccgcagcacgacgtgctctttgacaacctcactgtccaggag
cacctgctattctacacacagctgaaggggtattcccaggagaagattccagctgaggtg
gaccggatcatcaggattctgaacctggaggacaagcgacattcccactccaagaccctg
tcaggtgggatgaagaggaaactatccattggcatcggcctcatcggagactccaaggtg
gtgatgttggatgagcccacgtcgggcatggacccgtcggcgaggcgggccacctgggac
ctgctccagggtgagaagcgcgggcgcaccatcctgctgactacacactttatggacgag
gccgacctgctgggggaccgtatagtcatcatggctgggggagagctgcagtgctgcggc
tcgcctctgtttctcaagaacaaatatggtgctggctaccacatggtgatcgtgaaggat
gcgctgtgcaacgtgtctgagatcacacgtctggtccacatgtacgttcccaatgccacg
ctggagagcagtgctggggctgagctctcatacattctgcccaaagagagcaccaaccgg
tttgagcttctgtttgcagagctggagatgaacagagaggagctgggcatcgccagctat
ggagcctctgtcaccaccatggaggaggtcttcctcagagtggggaagctggtggattct
agcctggacatccaggccatccagctgcccccgctgcagtaccaacacgagagacgctcc
catgactggaccatggacgacaccagcagctacagcggcatgacggacgtcaccgacttc
actgacagcggcacgctcatctccgaggactgctccaacatcaagctcaacaccggggcc
agactgtacatgcagcagttctatgccatgttcctgaagcgggcgctctatagctggagg
aactggaaggtgattgtggcccagttcctggtgcccctggtgttcaccgtgctggccctg
gtggtggcaaagaccttccccgggcgccacgactcaccgcagctgaggctggcactgggc
cgctatggccccaccaccgtgcccgtggccctggagcccggcaagggaccgctggcaatc
gccctggcacaggtgtattcttcacaattggccgcccagcaagcccaggacgtcaatatt
agggacttcacggagtacgtgctcaccaagaccgaggaggagggtggggcattcaacgag
cgctgcgtggtgggtgcatcattcagaggcggcacggagaagtttgccgaggtcacggcc
tacttcaataaccagggctaccacacggccgctacagccctgatgatggtggacaacacc
ctgttcaaaatgctggccgggcccaacgcatcgattatgacgggaaacatgcccatgccc
cgcaacgtctccgagagcgcccagagtcagctgacagaaggtcagacaggctttgccatc
gccatcaacctcatgtatggcatggcatccctgtccagtaccttcgccctgctcctggtc
acagagcgttcactcaagtccaagcacgtacagcaggtcagcggcgtctacctctccaac
ttctggttctctgcactgctctgggacctggtcaacttcttcctgccctgcatgctcatg
ctggtggtgttccgggcgtttggggtcaaggccttcgtagcagacaaccacctggttgat
gtgttattactcctgctgctatatggctgggccgtcatccccctcatgtacctgctcagc
ttcctgttctccaccgctgccaccgcctacacccgcctcaccatcttcaacatcatcagc
ggcaccgccaccttcctcaccgtcaccatcatgaccatcccagagctatatctacaggac
ctatctcgtaacctggacaaggtgttcctgctcttccctaactactgcctgggcatgtcc
ttcagccagttctaccagaactaccagttcatcaccttctgcacccccaaccccgtgacc
atggccttctgccgtgccttcaacatcacgtaccaggagaactacttctccatgtcggag
ccgggggtggggcgtttcctggtggccctgtccctgcaaggtgtagtcttcatcaccctc
ctcttcatcatcgagatgcagtgtgtcaaaaccctccgccgcttcctcacccacctcgcc
agcagacgtaaacagttgcctctgatgggggatgcggccctactgccggaggacagggac
gtagcggaggagaggaagagggttctggagtgtcagcccatagtagaatctatggtgggg
agcccactcattctgcaggacctcagcaaggtatacagcagtggagaaacagtactggcg
gtagacagactctctctagcagtggggaaaggagagtgttttggcctgctgggtttcaat
ggagcagggaagaccaccaccttcaagatgctcaccggggacgagactgtcacctctggc
gatgcctacattgacggctacagcattctgagggatgtcaagaaggtacagcagcggatt
ggctattgcccgcagttcgacgctgtcctggatcacatgacaggaagagaaacgctgagc
atgtatgctaggctccgggggataccagagaaatacgtgtcaggctgcgtggagaacgtg
ctacggtccttactactggagccccatgctgacaaactgtgccgcagctacagtgggggc
aataagaggaagctgagtgcggctgtggctctgattggtggacccccggtcatcttcctg
gacgagccgtccactggcatggacccggttgctaggcgactgctgtgggacgctgtgacg
cgcacccgggagtctggaaaggccatcatcatcacctctcacagtatggaggaatgcgag
gccctgtgtacccggctggctgtgatggtgaacggtcagtttaagtgtctgggcagtccc
cagcacctgaagagtaagtttggcagcggctacacactactggctaaagtacgagtggac
aaggaggtggaggatagcgacctgcaactctttaaggacttcatcgagagcaccttccca
ggaagtctactaacagatgaacaccagggcatggtacactaccacttaactgacaagact
cttacctgggcacaggtgtttggcaccctggaggcagccaaagagaagtacaacatcgac
gactacgctgtgagccagatctccttggaacaggtgttcctcagcttcgcccagttccag
cactgcagcaggaaatag
DBGET
integrated database retrieval system
