Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396392
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Entry
139396392 CDS
T10872
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
139396392
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
HECT type E3
139396392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
139396392
NCBI-ProteinID:
XP_070999530
LinkDB
All DBs
Position
3:47645181..47694351
Genome browser
AA seq
1530 aa
AA seq
DB search
MRPSLAVLPRTRNHPPTAPPHNAHGLSAHVGREHLSAPRRRSPHLRHTLSPENLRSLAER
GGAARDTASVVSSPMGLPRANSDTDLVTSQGRSSLTASTLEFTLGRGQNLVISWDIKEEV
DATDWIGLYHIDEISPSNVWDCKNRGVNGTQRGQIVWRLEPGPYFMDAETKICFKYYHGV
SGALRATTPCITVKNPGVLGEGQSEGQSSTDHPRKLISFTLTDMHAVGLKKGMFFNPDPY
LKMSIHPGKRSGFPTFSHHGQERRSAIIANTTNPKWRGEKYTFVALMTDILNIEVKDKFA
KSRPIIKRFLGQLTIPVQRLIEKIPGLQPLSFSLCRRLPTEHVSGQMQFRVELTSTGPDG
ASPDSIIGVPNNGAPGTPSDDEDLPHLLPGVVTGGPSPTGSLGSQRSWEGGATAYPVPDY
RDFSGTEGRTTEGESYSGPLRLQRSLSEGLDAIEAPKGPGERPLGAASPKLRSSFPTHTR
LSAMLHIDSDEDEERSGPTDIYPVPGSPLLLNGGPEGPEEEDVVPELQQDPDPEQLEPRV
VGDERLIVTGEDCAPGGESNVAPELDLALDFEDSSEPDVFSEVEEVPFFSEALSQSLLAV
GLEGPEEGQGPADNPSSPIDTCSMAMAPQTVFSSSESRPITMSTAEEAEERAVAAIDPGG
DSFTGTPPTHQHVDDEGGGHTSANEVEGDAPSANALEPGEEISERMWSLQVSGDVPQDEE
EGEEPRPAGVAVSVDSDAVAMEADGEDGAQVNGHPVHCLPSVRHDIHRYQRVDEPLPPNW
EARIDSHGRIFFVDHVNRTTTWQRPTGPPAPQGLTRSSSIQQMEQLNRRYQSIRRTMTSE
RSEENTVDLPPEPTESDFLPQTIPEYRRESAVGHSSSRSRLSLLLQSPSAKFLCSTDFFT
VLHSNPSAYSMFTSNTCLKHMISKVRRDAHHYERYQHNRDLVAFLNMFTNSQLELPRGWE
MKHDQTGKPFFVDHNCRSTTFIDPRLPLQSAHSTSLLAHRQHLNRQRSHSAGEVVDDMRH
SSPPVVPCPSSTFSGSTRNQDLVPVAYNDKIVAFLRQPNIIEILQERQPELVRNHSLKER
LQFIRSEGVSGLARLSSDADLVILLSLFEEEVMSYVPPHALLHPSYCSSPQSSPGTQRAN
ARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQ
RSKLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDN
HHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKD
NDIEDMLDLTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQT
ESLVRGFYEVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFW
AAVERFNNEQKLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFN
RLDLPPYPSFSMLYEKMLTAVEETSTFGLE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcactcgcggtccttcccaggacccgtaaccatccccccacagcccccccc
cacaatgcacacggactgtctgcacacgtggggcgggagcacctgtcggccccacggagg
cgcagcccacacctgcgacacacgctcagcccagagaacctgcggagcctggcggagcga
ggcggtgccgccagggacacggcttctgtggtgagcagccccatgggtctcccgagggcc
aacagcgacacagacctggtgacctcgcagggccgctcgtcgctgactgcgtccacactg
gagttcacgctggggaggggccagaacctggtcatctcctgggacatcaaggaggaggtg
gacgccaccgactggatcggcctgtatcacattgatgaaatcagcccatccaatgtgtgg
gactgtaagaaccgtggggtgaatgggacacagaggggccagatcgtctggaggttggag
cctgggccttacttcatggacgctgagaccaagatctgcttcaagtactatcacggcgtc
agtggagccctgagagcaaccaccccctgcatcactgtgaagaaccctggagtcctggga
gaaggtcaaagtgaggggcagtcatccacagatcatcctcgcaaactaatcagctttact
ttgacagatatgcatgcagtggggctgaagaaggggatgttcttcaacccggatccctac
ctgaagatgtccatccaccctgggaagagaagtggcttccccaccttcagccaccacgga
caggagagacgctctgccatcatcgccaataccaccaaccctaagtggcgcggagagaaa
tacacttttgtagcactgatgacagacattctgaacatcgaggtgaaggacaagtttgcc
aaaagtcgaccaatcatcaaacgcttccttggtcagctgaccattcctgtgcagaggctg
attgagaaaatacctggtctccagcctctgagcttctctctgtgtcgacggttgcccact
gagcacgtgagtggccagatgcagttcagggtggagctcacatccactggacctgacggg
gcctctccagactctatcatcggtgtgcccaataacggggcccctgggactccatcagat
gacgaggatctgccccacctactcccgggggtggttactggaggcccctcccctactggc
tccctgggctcacagaggtcctgggaaggcggggccacagcctatccagtcccagactac
agggactttagcggtacagagggcagaaccaccgagggtgaatcctactctggccctcta
cggttgcagaggtccctgagcgaaggcctggatgccatcgaggcccccaagggccccgga
gagaggcccctgggcgccgcttcaccgaagctgcgctctagctttcccactcacacacgt
ctcagtgccatgctgcacattgactcagacgaagatgaggagcgctcggggcccactgac
atttacccggtgcccgggtcccccctgctgctcaacgggggtcccgaggggcctgaagaa
gaagacgttgtcccagagctacagcaggatcctgaccctgagcagctggaacccagggtg
gtgggagatgaacggctgatagtaacgggggaagattgtgcccctggtggtgaatccaat
gtggcccctgagttagacctggccctcgacttcgaggactcctcagagcctgatgttttc
tcggaggtggaggaagttcctttcttctcagaggcgctgtcccagagtcttttggctgtg
ggcctggaggggccagaggagggccaggggcccgctgacaacccctcgtcgccgattgac
acctgctccatggcaatggccccacagacagtcttctcttcctcagagagtcgcccaatc
acaatgtccacggctgaggaggcagaggagagggcagtagctgccattgacccaggggga
gactccttcactggcactccacccacccaccagcacgtagacgacgaggggggcgggcat
acgtcagccaatgaggttgaaggagacgctccgtctgccaatgcgctggagccaggggag
gagattagtgagcggatgtggagcttacaggtatctggggatgttccccaggatgaggag
gagggggaggagccaagacccgcaggggtggccgtatctgttgattcagatgcagttgcc
atggaggcagatggagaagacggtgctcaagtgaatggtcaccccgtgcactgcctcccc
tcagtgcgccatgacattcaccgttaccaacgagtggatgaaccgttacctcctaactgg
gaggcgaggatcgatagtcacggtcgtattttctttgtcgatcacgtgaaccggaccacc
acgtggcagcgccccaccggaccccccgctccccagggcctgacccgctccagctccatc
caacagatggagcagctcaaccgcagatatcagagcatcaggaggaccatgaccagtgag
aggtctgaggagaacacagttgacctcccgccagagcccacagagagtgactttctgccc
cagaccatccctgagtacaggagagagagcgcagtgggtcactccagctctcggtcgcgt
ctctctctgctgctccagtccccaagcgcaaagttcctgtgcagcacagacttcttcacc
gtgctgcattctaaccctagtgcctacagcatgtttacgagcaacacctgcctgaagcac
atgatcagtaaggtgcgtcgggacgcccaccactatgagcgttatcagcacaatcgggac
ctggtggccttcctcaacatgttcaccaacagccagctggagctacccaggggctgggag
atgaagcacgaccagaccggcaagcccttctttgtggatcacaactgtcgctccacaacc
ttcatcgacccgcggctccccctccagagtgcacactcaactagcctgctggcccaccga
cagcaccttaaccgccaacgcagccacagcgcaggcgaggtggtagatgacatgcgacac
tccagcccacctgtcgtgccctgcccctccagcaccttcagtgggtccactcgcaatcag
gacctggtgcctgtggcctacaatgacaagattgtggcgtttctacggcaacccaacata
attgagatcctgcaggagaggcagccagagctcgtcaggaaccactcactcaaggaaagg
ttacagttcattcgcagtgagggtgtttctgggcttgctcgtctctctagcgatgctgat
ctagtcattttgctcagcctgtttgaagaggaggttatgtcctatgtgccacctcatgcc
ttactgcaccccagctactgctcctcccctcagagctcccccggtactcagcgggcgaat
gcacgcgcccctgccccttacaaacgtgactttgaggccaaactgagaaacttctatcgc
aagctggagacgaaaggctatggccagggacctgggaaagtcaaattgatcattcgtaga
gatcacctattggaggatgccttcaatcagataatgtgctactcccgcaaagatctgcag
aggagtaagctctacgtcagctttgtgggcgaggaagggctggactacagcggcccctcg
agggagttcttcttcctggtgtcgagggagctgtttaacccttactacggcctgtttgag
tactccgccaacgacacctacactgtgcagatcagccccatgtctgccttcgtggacaac
catcacgagtggttccgtttcagtgggcgtatcctgggcctggctctgatccaccagtat
ctgctggatgccttctttacccgcccgttctacaagggcctgctgcgcatcccgtgtgac
ctgagtgacctggagttcctggatgaggagtttcaccagagtttacagtggatgaaagac
aatgacatcgaggacatgctggacctcacctttaccgtcaacgaggaagtctttggacag
atcacagagagagagctgaagccaggcggggcaggtattccagtgtcagagaagaataag
aaggagtacatcgagcgtatggttaagtggcgcatcgaaaggggtgtggctcagcagacg
gagagcctggtgcgaggcttctatgaggtggtggatgtgcggctggtatctgtgtttgat
gcccgggagctggagctggtgatcgctggcactgcagagatcgacctggcagactggagg
aacaacacagagtacagaggagggtaccatgacaaccacatagtaatccgctggttctgg
gctgcagtggagaggttcaacaatgagcagaaattgagactgctgcagtttgtgacaggc
acctccagtattccctatgagggctttgcctccctcagaggtagcaatggaccacgcagg
ttctgtgtggagaagtggggcaaaatcacctccttgcccagggcccacacatgctttaac
cgtctggacctcccgccgtacccgtcgttctccatgctctacgagaaaatgctgacggcc
gtggaggaaaccagcacctttggcctggagtaa
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integrated database retrieval system
