Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396588
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Entry
139396588 CDS
T10872
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139396588
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139396588
NCBI-ProteinID:
XP_070999642
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Position
3:complement(49493596..49690786)
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AA seq
698 aa
AA seq
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MDVDEEENMSSSSTDVKENRNLDNVSSKEGEAVAEQLPNGSGGGSRKRPLEEGNNGHTHS
KFRAKKRKKTPGPVLPKNALMQLNEIKPGLLYKLLSQTGPVHAPVFVMTVEVNGQLFEGS
GPTKKKAKLNAAEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETP
APPEDSFYLGSNGSGCLNSLGEYSMPSTPGANLAQALLPPPSAFTSPSSGKNPVMILNEL
RPGLKYDFLSESGESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQ
TPSRQPIPREGLQLHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDV
KEAQVICVSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEHFLSSNKEEQQ
KSIFTRCDKRGYRLRDNVLFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRT
KIESGEGTIPVRTSNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYF
SSIILGSLYHADHLSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNW
AVGDLALEVINATTGKDDMGRASRLCKHALYSRWVRLHSKLSSTLRIKVSKPSSYHDAKQ
AAVEYHNAKQTLIKVFHKSGLGAWVKKPIEQDQFSLNS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgaagaggagaacatgagttcgagcagcaccgacgtaaaggaaaaccgt
aacctggacaacgtctcctccaaagagggggaggctgtggctgagcagctccccaatggc
agtggcgggggcagcaggaagcgccccttagaggagggaaacaatggccacacgcactcc
aagttccgggccaagaagcgtaagaaaacgccaggcccggttctacccaagaatgccctt
atgcagctgaatgaaattaagccggggctgctgtataagctgctatctcaaacgggtcca
gtccacgctcccgtgtttgtcatgaccgtcgaggtcaatgggcagctgttcgagggctca
ggtcccaccaagaagaaggccaagctgaatgcagcagagaaggcactgcgctcctttgtc
cagttccccaacgcctccgaagcgcacctggctatgggccggacactgacagtcaacaca
gacttcacatccgaccaggccgacttcccagacatgctcttcaacgggtttgagacgccc
gcaccgcccgaggactccttttacctgggctccaatggcagcggctgcctaaactcgctg
ggagagtactccatgccttccaccccaggtgctaacttagcccaggccctgttgccccct
ccctcagccttcacctcgccctcgagcggcaagaaccctgtcatgatcctcaatgagctg
aggccgggcctcaagtatgactttttgtccgagagcggcgagagccatgcaaagaacttt
gtcatgcaggtgtcggtggactcacagcagttcgagggctctggacgaaacaagaagctg
gccaaggcccgggccgcccaggcagccctctcagcccttttcaacatgcagctggaccag
acgccctcccgacagcccatccccagagagggactgcagctccacctaccccaggtcctc
gccgacgcggtctctcgcctggttgtggacaagttcagcgagctgacggacaacttcacc
tccccccacgcgcggcggaaagtcctggcaggggtcgtcatgacaacaggcacggacgtg
aaagaggcccaggtgatctgtgtctccacgggcaccaagtgcatcaacggcgagtacatg
agtgaccgcggcttggcgctcaacgactgccatgcagagattatcgcccgtcgctcgctc
atccggtacctctacacccagctggagcacttcctaagcagcaacaaggaggagcagcag
aagtccatattcacgcgctgtgacaagcgtggctaccggctaagggacaatgttctgttc
cacctctacatcagcacctcgccctgcggagacgcacgcatcttctcaccgcacgaggcc
ggcatggaagaccaaggagaccgacaccctaaccggaaggcgcggggtcagctgaggact
aaaatagagtctggggaggggaccattcccgtgaggaccagcaacaccatccagacatgg
gacggggtgctgcagggagaaaggctgctcaccatgtcctgcagtgacaagatcgcaaga
tggaacgtggtgggcatccagggctctctgatgagctacttcacggagcccatctacttc
tccagcatcatcctgggcagcctgtaccacgccgaccacctctcccgggctatgtaccag
cgcatcgccgacatcgaggacctgccccaacagttcagcctcaacaggcctctactgagc
ggcatcagcaacgcggaggcgaggcagccgggcaaggcacccaatttcagcgtgaactgg
gcggtgggcgacctggcgctggaggtcatcaatgctaccacgggcaaagacgacatgggg
cgcgcctcgcgcctctgcaagcacgccctctacagccgctgggttcgcctgcattccaag
ctgtcatccacactgaggatcaaggtgtccaagcccagctcgtaccacgacgccaagcag
gcggcagtggagtaccacaacgccaagcagactctcatcaaggtcttccacaagtcgggc
ctgggggcctgggtgaagaagcccatcgagcaggaccagttctccctcaactcctga
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