Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396830
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Entry
139396830 CDS
T10872
Name
(RefSeq) cell adhesion molecule 4-like
KO
K06783
cell adhesion molecule 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139396830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139396830
Cell adhesion molecules [BR:
ocla04515
]
Immunoglobulin superfamily
Nectin family
139396830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
C2-set_2
C1-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
139396830
NCBI-ProteinID:
XP_070999848
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MRPGPRSLLLPTPLSLSLRALLLLCLASRCQAVQAENVTVLEGGTAQISCRLQNYDGSIV
VIQNPRRQTLFFNGTRALKDDRFQMVLFTPRLVRITLTNVSVSDEGGYFCQLYTDDTHHQ
VATLSVSVPPDTPTVEVKQEAVEGGEVELTCLSPRSKPPATLRWIRDRREIPGVVSQQEN
GKTVSVSNTIRLPVERKDNGAAVSCEASHPALGGQKRVRHYRLDVHFAPTVRIIPPPGIL
REGDSLSLTCSITGNPLPRDVQWTRINDTLPERAEISGPTLQVSRLSQSHNGTYLCQAQN
NYGRAADHYTLLVYENVSVTTMVLPTSHHATSHPTTLLLTPSYAPDPR
NT seq
1045 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctggcccgagatctctccttctcccaacccccctctccctctccctgcgtgcc
ctgctcctgctctgccttgcgtcgcgttgccaagcggtgcaggctgagaatgtgacagtg
ttggagggaggcacggcccagatctcctgtcgtctgcagaattatgatggctccatcgtg
gtcatccagaaccctcgcagacagaccctcttcttcaacggcacacgagcgttgaaggac
gaccgtttccagatggttctcttcactccccgtctggtgcgcatcaccctcaccaacgtg
agcgtgtcggacgagggcggctacttctgccagctctacaccgacgacacccaccaccaa
gtggccacgctgtccgtgtccgtccctcccgacacccccacggtggaggtgaagcaggag
gccgtggaggggggcgaggtggagctcacctgcctgtcgccgcgcagcaagccccccgcc
acgctgcgctggatcagggaccgccgggagataccaggtgtggtgtcccagcaggaaaat
gggaagacagtgagtgtgtccaacaccatccgtctccctgtggagagaaaagacaacggg
gcagcggtcagctgtgaggcatcccaccccgccctgggggggcagaagagggtccgccac
taccgcctcgacgtccactttgcccccacagtgaggatcatccctccccctggcatcctc
cgagagggagactctctcagcctcacctgctccatcactggaaacccactgcctagagat
gtccagtggactaggattaatgacaccttacctgagagggcggagatctctggccccacc
ctccaggtgtcccgtctcagccaatcacacaacgggacctacctgtgtcaggcgcagaac
aactacggccgtgccgccgaccactacacgctgctggtgtacgagaatgtgtctgtcact
accatggtacttcccacctcccatcatgccacctcccacccaaccaccctcctcctaacc
cccagctacgcaccggacccccgag
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