Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396832
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Entry
139396832 CDS
T10872
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139396832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139396832
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Serotonin (5-HT3)
139396832
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CRE9
DUF4264
Motif
Other DBs
NCBI-GeneID:
139396832
NCBI-ProteinID:
XP_070999850
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MLIAKEALSQPQSPSCISNISVPLIVYETLSVDTKNLRFESRLQVILSWEDPDLSWDTSV
YHHDVVVLPVSKIWTPELHVTNGVQTTMKHGNKDLLVHSNGTIEHMVIMNTVVGCEVNLY
NYPFASDFCAIGINVWVFSGCGMFLNFGKVSKTSANRGDWLTEEVELNAKGGRDDRNYLW
VSLKMRSENPFLSLVLPSILIIVADVVSFSLPLGGGERIPFKVTLVLSFIMFLIILNDLL
PGGGQCSPIIRKHFCFCLVILVLSTLQSMVLTRLAKCGTLWPCSLSKSKDSLLKDTDNEE
VSKSDIAVIKLKASEEKKKNTDLQKVVKFLNKMAAQDQKKARRHRLANKVDLICFCIYLT
VLIVYAVIILYFSFGSSCEINHLEFCEY
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgcgaaagaagctctgagtcagccacagtctccatcatgcatctcaaatatc
agtgtgccgttaatagtgtatgaaactctgtctgtcgatacaaaaaacctccgcttcgag
agtcgtctgcaggtcatactgtcttgggaagaccctgatttatcatgggacacatcagtc
tatcatcatgatgtggtggtcctgcctgtcagtaaaatctggactcctgaactccatgtg
actaatggagtgcaaacaacgatgaagcacggcaacaaggatttactggtgcacagcaac
gggactatagagcacatggtcatcatgaacactgtggtgggctgtgaggtcaatctgtac
aattaccccttcgcttcagatttctgtgccatcggaatcaatgtatgggtatttagtgga
tgtggcatgttcctgaactttgggaaagtgagcaaaactagtgcaaaccgcggagactgg
ctaaccgaggaggtggaactcaatgctaaaggaggcagagatgatcgcaactatctatgg
gtgtcgctgaaaatgcggtctgaaaacccatttctgtccctggtcctgcccagtatactg
atcattgtggcagatgtggtgagcttctccctgccactgggagggggcgagcgtatccca
ttcaaggttacactggttctcagcttcattatgttcctcatcatcctcaacgacctactg
cctggaggaggccagtgcagccccatcatccgaaagcacttctgtttctgtttggtcatc
ctggtgttgagcacgttgcagtctatggtgctcacacgcctggctaagtgtggcactctc
tggccctgcagcctctccaagtccaaagactcactgcttaaagacacagacaatgaagag
gtatccaaatctgatattgctgtcatcaaactgaaagcctctgaggaaaagaagaagaat
acagacctccagaaggtggtgaaatttctcaacaaaatggctgcacaagatcagaaaaaa
gcaagacgccatcgccttgccaacaaagtggacttgatctgtttctgtatctatctcacc
gtcctcattgtttacgcagtcatcattttatatttctcctttggttcttcatgcgagatc
aaccatttagaattctgtgaatactaa
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