Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396833
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Entry
139396833 CDS
T10872
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139396833
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139396833
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Serotonin (5-HT3)
139396833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CemA
Motif
Other DBs
NCBI-GeneID:
139396833
NCBI-ProteinID:
XP_070999851
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MLIAKEARSPPQSPRCISIIRVPSIVYETLSVDTKNLRFESRLEVPLSWEDPDLSWDTSV
YHHDVVVLPVSKIWTPELHVTNGVQTTMKHSNKDLLVHSNGTIEHMVIMNTVVGCEVNLY
NYPFASDFCAIALNVWAISGCGMFLDFGNVSKTSANRGDWLTEEVELNAKGGRDDRNYLW
VSLKMRSENPFLSLVLPSILIILADVGSFSLPLGESKRIPFKVKLVLSFIMFLNILKDLL
PGGGQCSPIIRKHFCFCLVILVLSTLQSMVLTRLAKCGTLWPCSLSKSKDSLLKDTDNEE
GKRFHSSVISVTDIKASEEEKNTALQKVVKFLNKMAAQDHKNALHHRFANKVDLICFCIY
LTVLIVYAVIILYFSFGSQCEINHLEFWH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgcgaaagaagctcggagtccgccacagtctccacggtgcatctcaattatc
cgtgtgccgtcaatcgtgtacgaaactctgtctgtcgatacaaaaaacctccgcttcgag
agtcgtctggaagtcccgctgtcttgggaagaccctgatttatcatgggacacatcagtc
tatcatcatgatgtggtggtcctgcctgtcagcaaaatctggactcctgaactccatgtg
actaatggagtgcaaacaacgatgaagcacagcaacaaggatttgctggtgcacagcaac
gggactatagagcacatggtcatcatgaacactgtggtgggctgtgaggtcaatctgtac
aactaccccttcgcttcagatttctgtgccatcgcccttaatgtgtgggcaattagtgga
tgtggcatgttcctggactttgggaatgtgagcaaaactagtgcaaaccgtggggactgg
ctaaccgaggaggtggaactcaatgctaaaggaggcagagatgatcgcaactatctttgg
gtgtcgctgaaaatgcggtctgaaaacccgtttctgtccctggtcctgcccagtatacta
atcatcttggctgatgtgggcagcttctccctgccgctgggagagagcaagcgcatcccc
ttcaaggttaaactggttctcagcttcatcatgttcctcaacatcctcaaggaccttctg
cctggaggaggccagtgcagccccatcatccgaaagcacttctgtttctgtttggtcatc
ctggtgttgagcacgttgcagtctatggtgctcacacgcctggctaagtgtggcactctc
tggccctgcagcctctccaagtccaaagactcactgcttaaagacacagacaatgaagag
ggtaaacgttttcattcttctgtcatctcagttactgatattaaagcctcagaggaagag
aagaatacagccctccagaaggtggtgaagtttctcaacaaaatggctgcacaagaccac
aaaaatgctttacaccatcgctttgccaacaaagtggacttgatctgtttctgtatctat
ctcaccgtcctcattgtttacgcagtcatcattttatatttctcctttggttctcaatgt
gagatcaaccatttagaattctggcattaa
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