Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396913
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Entry
139396913 CDS
T10872
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
ocla01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
139396913
Spliceosome [BR:
ocla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139396913
Complex C
U4/U6.U5 tri-SnRNP related factors
139396913
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
139396913
Chaperones and folding catalysts [BR:
ocla03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
139396913
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
U-box type E3
139396913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139396913
NCBI-ProteinID:
XP_070999944
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKRSEIPKSNFRRLPFDHCSLSLQPFEYPMCTPEGIV
FDLLSIVPWIKKFGTNPISGEKLEAKSLIKLNFAKNNDGKYHCPVLYTVFTNNSHIVTNK
LTGNVFSHEAVEQLNVKTKSYRDLLSDEPFTRQDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKLDPGYHLNSTNMETRETLAELYKDYKGDALLASTMKEPQAKKTDKLNAAH
YSTGRVSASFTSTAMTPATEHTADAISDDTVRYSYVKKKGYVRLHTNKGDINLELYCDKV
PKAGENFTKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGLGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCPYLDRKHTVFGRVVGGFEALTAMENIEADPKTD
KPKSEIKLLSATVFVDPYEEADAQIAAERQKELEKQEEDRAQTSLSQRKTKADQAPKTFK
AGIGKYINPVTSTTTKRPAVEDSGPSTSGAKKAKGKTGFGDFSSW
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgtcaacatcagaaggataaaatgtacatcacatgtgctgagtacacccat
ttctatggagggaaaagatcagaaattccaaagtcaaattttcgacgtcttccatttgac
cattgcagcttgtctctgcagccgtttgaatatcccatgtgcactcccgagggaatcgtc
tttgacctgctgagcatcgttccttggataaagaagtttggcaccaatcccatctctgga
gagaaactggaagcgaagtccctcatcaagctgaacttcgccaagaacaacgatggtaaa
taccactgtcccgtcctgtacacagtcttcacaaacaactcccatatcgtcaccaacaag
ctcactggaaatgtgttctctcacgaggctgtggaacagctcaacgtcaagacgaagagt
tacagagacctgctctctgatgaacctttcaccagacaggacatcatcaccctgcaggat
ccaaccaacctggataagttcaatgtctcagacttcttccacgtcaagaacaacctcaaa
gtactggaccctgatgaggagaaggctaagctggaccctggttaccacctgaacagtacg
aacatggagaccagagagaccctggctgagctctataaggattataaaggagacgctcta
ctggcctccaccatgaaggaaccacaggccaagaagacagacaaacttaacgcggctcat
tactctactggcagagtgtctgcttccttcacctccacagccatgacccctgctaccgaa
cacactgcggatgccatctcagacgacacggtgcgttattcctatgtgaagaagaaaggc
tatgttcgcctccacaccaacaagggagacatcaacctggagctgtactgtgacaaggtt
cctaaagcaggagagaacttcaccaagctgtgtaagaagggttactatgacggaactgtc
ttccacagatctatcaggaacttcatgatccaaggaggagacccaactgggactggttta
ggaggagagtcattctggggtaagcccttcaaagatgagttccgtcccaacctgtcccac
accggacgaggggttctcagcatggccaactcaggacccaacaccaacaagtcccagttc
ttcatcaccttccggtcatgtccctacctggacaggaaacataccgtgtttggaagggtg
gtgggaggcttcgaggctctgacagccatggagaacatagaggctgatcctaaaaccgat
aaacccaagtctgagatcaagctgctgagtgccactgtgttcgtggacccgtatgaagag
gcagatgcccagattgcagcggagcgtcagaaggagttggagaagcaggaggaggatcga
gctcagaccagtttgtctcagaggaagactaaagcagatcaggctcccaagaccttcaag
gctggcatagggaaatacatcaaccctgtgacctctaccaccacgaaacgtccagcagta
gaggacagcggaccgtccaccagcggagccaagaaggccaaaggaaagactggctttgga
gacttcagctcctggtaa
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