Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396942
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Entry
139396942 CDS
T10872
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C-like isoform X1
KO
K03252
translation initiation factor 3 subunit C
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ocla03012
]
139396942
Translation factors [BR:
ocla03012
]
Eukaryotic type
Initiation factors
eIF-3
139396942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
DUF2779
Motif
Other DBs
NCBI-GeneID:
139396942
NCBI-ProteinID:
XP_070999974
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MSRFFATGSDSESESSSSADEITPKAPGATFTKQSLLLSDDEEDTKRVVRSAKDKRFEEL
TNLIKTIRNAMKIRDMSKCLEEFEQLCRAFLKSKTIVDKEGVPPFYIRLLADLEDYLNQL
WEDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEITSYKENPMASADEEEEEEEKYDVD
SGSSSDSDEVPGVAKSFLKKKPAAEVAAPLPDASKFLKAAADKEASSSSSDEDDEDWDSD
TVESGNGSEDEESKNASMAQIFLKKPGSEAERHTSEKKKEDRKKRHRRKERLEEEAEEEA
QEEGEGEWEKVKGGVPLVKMFAKGTEINTTVVVKKLNEILQARGKKGTDRAAQIELLHAL
ANISNENNLGEGILVKIKFNIIASLYDYNPNLAAFMKADMWKTCLDCIDELLDILFNNNN
IFIGENIAEDSENLAVTDSQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDE
GRVCGIIDRLLGYLETKGSTEEVCRVYLRRIMHTYYKFDYKAHRRALGLQGETKSEQDAE
ESEGEDSAFIMDRLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDN
IQHADPPVQILYNRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQE
RNAEQEKIEKRRQVPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKQFHHQ
LRVGERQPLLGPPESMREHVVAASKSMKMGDWRTCHSFIINEKMNSKVWDLFPETQCVRE
MLVRKIQEESLRTYLFTYSSVYDSISMETLNEMFELELPTVHSIISKMIINEELMASLDQ
PTQTVVMHRTEPTSLQNMALQLAEKLGGLVENNERIFDLKQGVYGGYFNRDQKGGYQQKQ
GGYNRDQRGSYQQKQGGYNRDGQRGSYQPKQGGYNRDGGGYQQRGGYNRDGGSYQQRGGY
NRDGNRGGGGGYQGQNRGGYQGGGGYQGGGGYQGGGGYQGGGGYQGGYRGGYKGGYQNQD
RRDY
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttctttgccaccgggtccgacagcgagtccgaatcctcctcgtcggctgac
gagatcacccctaaagcacctggagctactttcaccaagcagtcattgctacttagtgac
gatgaggaggacaccaagagagtggtgcgcagtgccaaggacaagaggtttgaggagctg
acaaacctgatcaagacgatccgcaacgccatgaagatccgagacatgtccaagtgtctg
gaggagtttgagcagctatgtcgagcgttcctcaaaagcaagactatagtggacaaggaa
ggggtgccccctttctacatccgtcttctggctgacctggaggactatttgaatcagctt
tgggaggacaaagaaggcaagaagaagatgaacaagaacaacgccaaagccctcagcacc
ctgcggcagaagatccgcaagtacaacagggattacgagacggaaatcaccagctataag
gagaacccaatggcgtcagcggatgaggaggaggaggaggaggagaagtatgatgtcgac
tcagggtcgtcgtcagatagcgacgaagtgccgggggttgccaagagcttcctgaagaag
aaaccggctgccgaggtggcagcgcctctgccggacgccagcaagttcctgaaggcagcg
gcggacaaggaggcttccagcagcagcagtgatgaggatgacgaagactgggactcggac
accgtggaaagcggcaatggtagtgaagacgaagagagcaagaatgcctccatggcccaa
atcttcctgaagaagcctggtagtgaggcagagcgacacaccagcgagaagaaaaaggag
gataggaagaagagacacaggcggaaggagcggctggaggaagaggccgaggaagaggcc
caagaggagggtgaaggcgaatgggagaaggtgaagggaggcgtgccccttgtcaagatg
tttgccaagggaacagagatcaacacaacagttgtggtaaagaaactcaatgagattctg
caggcccgtggaaagaagggaacagacagagctgcccagattgaacttctccacgctctg
gccaacatctccaacgagaacaacctgggtgagggcatcctggtcaagatcaagttcaac
atcatcgcctcactgtacgactacaaccccaacctggccgccttcatgaaggctgacatg
tggaagacgtgtctggactgcattgacgagctgctggacatcctctttaacaacaacaac
atctttatcggcgagaacatcgcagaggacagcgagaacctggccgtaaccgactctcag
ccattcagggtgcgcggctgcattctgaccttggtggagaggatggatgaggaattcacc
aagatcatgcagaacactgacccccactctcaagagtatgtggacaacctgaaggatgag
gggcgtgtatgcggcatcatcgaccgcctgctgggctacctggagaccaagggcagcacg
gaggaggtgtgccgtgtttacctacgccgcatcatgcacacctactataagtttgactac
aaggctcaccgccgcgctctgggcctccagggagagaccaagtctgagcaggatgcggag
gagagcgagggtgaggacagcgccttcatcatggaccgcctgtgcaagttcatctacgcc
aaggaccgcacggaccgcatccgcacgtgcgccatcctgtgccacatttaccaccacgcg
ctacactcgcgttggtaccaggcccgtgacctgatgctcatgagccacctgcaggataat
attcagcacgccgacccacccgtacagatcctgtacaacaggaccatggtgcagctgggg
atctgtgccttccgccagggcatgatcaaggacgcccacaatgccctgctggacatccag
tcgagtggccgtgccaaggaactgctgggccagggcctgctcatgaggaacatgcaggag
aggaatgcagaacaggagaagatcgagaagaggcgacaggtgcccttccacatgcacatc
aacctggagctgctggagtgcgtgtacctggtgtctgccatgctgctggagatcccctac
atggcagcccatgagtttgatgcccgccgcaggatgatcagcaagcagttccaccaccag
ctgagggtgggcgagaggcagccccttctcggacccccagagagcatgcgcgagcacgtg
gtggcggccagcaagtccatgaagatgggcgactggcgcacctgccactcgttcatcatc
aacgagaagatgaacagcaaggtgtgggatctgttccctgagacgcagtgtgtacgagag
atgctcgtccggaagatccaggaggagtctctgaggacgtacctgttcacctacagcagc
gtttatgactccatcagtatggagacactgaatgaaatgtttgagctggagctgcccaca
gtgcacagcatcatcagcaagatgatcatcaatgaggagctcatggcgtccctggaccag
cccacccagactgtggtgatgcatcgcacagagcccacctccctgcaaaacatggccctg
cagctggctgagaagctgggcggcctggtcgagaacaatgagcgcatctttgacctcaag
cagggcgtgtatggtggctacttcaacagagatcagaaaggtggctaccagcagaagcag
ggtggttacaacagagaccagagaggcagttaccaacagaagcaaggcggttacaaccga
gatggtcagagaggcagctaccaaccgaagcagggaggttacaacagagatggaggcggt
taccaacagaggggcggttacaaccgagatggaggcagttaccaacagaggggcggttac
aaccgagacggaaacagaggaggtggtggtggctaccagggccagaacagggggggctac
cagggaggcgggggctaccagggaggcgggggctaccagggaggcgggggctaccaggga
ggcgggggctaccagggaggctacagggggggctacaaagggggctaccagaaccaggat
aggagagactactga
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