Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139396983
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Entry
139396983 CDS
T10872
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08525
retinoid X receptor beta
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03320
PPAR signaling pathway
ocla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
139396983
03320 PPAR signaling pathway
139396983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139396983
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139396983
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
139396983
Nuclear receptors [BR:
ocla03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
139396983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Nuc_recep-AF1
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
139396983
NCBI-ProteinID:
XP_071000029
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MSSHQPTSSASNSPTSTFGSPFSVISPSLGSPGVAPSMGYGPISSSQINSTMGMHSISSS
DDVKPPFGLRPMSAHSPGIMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLS
YTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQKSVQEERQRIREREEGLE
CSSAVNEEMPVEKILEAETSVEQRAELHSDTGSAGSSPHDAVTNICQTADKQLFALVEWA
KRIPHFSELPLDDQVILLRAGTIVWREGDNRRLDVICTVSKNRVYK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcatcagcccaccagttcagcctccaacagtcccaccagcacctttggctcg
cctttctcagtcatcagcccctcactgggctcccctggtgtggcaccctccatgggttat
gggcctattagcagtagccagatcaactctacaatggggatgcactcaatcagcagctcg
gatgatgtcaaacccccgtttggcttgaggcctatgtctgcacacagccctgggataatg
ctctcccagaaacgcatgtgtgccatctgtggagaccgctcctctggtaagcactatggt
gtgtacagctgtgaaggttgcaagggcttcttcaaacgcacagtgcgcaaggacctgagc
tacacctgcagggataacaaagaatgcctggtggacaagcgccagcgcaatcgctgccag
tactgtcgctaccagaagtgtctggctatgggcatgaagagggaagtggtccaagatgaa
cgtcagaaatcagtccaggaggagcgtcagaggatcagggagcgagaggagggactggag
tgcagcagtgctgtgaacgaggagatgcccgtggagaagatcttggaggcagagacgtcc
gtggagcagagggcggagctccactctgatacaggctccgctggtagctctccccatgat
gcggtgacaaacatctgccagactgcagacaagcagctgtttgcgttggtggagtgggcc
aagaggatcccccacttctccgagctgcccctggacgaccaggtcatcctcctgcgtgca
ggtaccattgtctggagggagggagacaacaggaggctggatgtgatatgcactgtctca
aagaatagagtttacaagtga
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integrated database retrieval system
