Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139397355
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Entry
139397355 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139397355
05100 Bacterial invasion of epithelial cells
139397355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139397355
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Macropinocytosis
Others
139397355
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139397355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
Motif
Other DBs
NCBI-GeneID:
139397355
NCBI-ProteinID:
XP_071000215
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MEGGNDVDLSNSNITPLWKRRSANHTGPSKLKARPLSYQIDGVHMTDFPVEDNKCSFTLS
QPAERLVATPGGGTVILKHVLNQPTRKTRVVRSISIGHLSKGRFSLSKFKSEDDKSLSLN
SKACHGGSVDNVWSDKPLLDTQNRLSSPFTLTAHRDQIVFGTSPSPLDSASSKHPSPPAS
PNNHQHDLTSPSSYHPLTPVPSPRNPSPSPPNPSPSTPSLNTPTPSHSSTSSINSLSSLI
STPSDLPTPHSPSSADMSAPSPSPSHSPTPTLSPYISLSPPPSIVLSTHSAAALKKGTQQ
LIPKGLASLSKASPAGVQSHGMGGLLGLDPTKRALRALSMVETGSFFSTGVGSGGGGTDQ
DESTETLKRGLRSTSYRRAVVSGVEMEIPSDDLKTHRLSQPVDPKSHRLSQPVDPKSHRL
SQPVDPKSHRLSQPVDPKSHHLSQPVLKGLQEVKERPTSPGKKNKSPDKKPGLITQRTFD
SEEEELYQNYQEKALHNDSDEDQSREAKPDDRIVMQYRPIRTSWSQLSVVKKSGVSDKLS
QEERKRQEAIFELISSEHSYLHSLEVLIRMFQNSAELSDTMTKTEHHHLFSNITDVCEAS
KKFFKELEDIHQQNIVIDDISDVVFRHAQSNFDPYITYCSNEVYQQRTLQKLVSSKSPVF
KEVLTRIEGHPDCRNLPMISFLILPMQRVTRLPLLMDVICQKAPKDSAQYETCKKALQSV
SKVVRQCNEGARTMERTEMMYTINSQLEFKIK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgggaacgatgtggatctgtccaacagtaacatcaccccgctatggaagcgg
cgctcagccaatcacactggccccagcaagctaaaggcccggcccctcagctaccagata
gacggagtccacatgactgacttccccgtagaggacaacaagtgcagctttaccctgagc
cagcctgcagagagactggtggccacgccgggaggagggacggtcattctgaagcacgtt
ctcaaccaacccaccaggaaaacacgggtagtcaggagtataagtattggacatctgtcc
aaaggacgtttctctctgtccaagttcaagtcggaggatgataagtcgctgtcgttgaac
agtaaggcatgccacggtgggagtgttgataatgtgtggtcagacaagcctctgctggac
acccagaatcgactatccagcccgttcaccctcaccgctcacagggaccagatagtgttt
gggacgagcccttcaccgctggactctgcctcctccaaacacccctctccccctgcctcc
cccaataaccaccaacatgacctgacctccccttcttcctaccaccccttaactcctgtc
ccctctccccgtaaccccagcccctctccccctaaccccagcccctccacccctagtctc
aacacccctaccccatcccacagctccacctccagtatcaactccctctcttccctcatc
tccaccccttctgacctccccacaccccacagcccctcctctgctgacatgtctgccccc
tctccttccccctctcattcccccactcccaccctctctccctacatctctctatctcct
cctccctccattgtcctcagcacccacagtgcagctgccctgaagaagggcacacagcag
ctgatccccaaagggctagcgtccctgagcaaggcctctcctgctggggtacagagccac
ggcatggggggtctgctgggcctggatcctaccaagcgggccctgcgagccctcagcatg
gtggagactggatccttcttctccactggcgtagggtccgggggaggggggacagaccag
gatgagagcactgagactctgaagagagggttgaggtctacctcgtacaggagagcagtg
gtaagtggagtggaaatggaaataccatctgatgacctcaagacccatcgtctgtcccaa
cctgtagacccaaagagccatcgtctgtcccaacctgtagacccaaagagccatcgtctg
tcccaacctgtagacccaaagagccatcgtctgtcccaacctgtagacccaaagagccat
catctgtcccaacctgtgctcaaaggactacaggaggtcaaggagagaccgaccagccct
gggaagaagaacaagagtcctgataagaagccaggactgatcacacagaggacatttgac
agtgaagaggaggaactgtatcagaactaccaggagaaagctcttcacaatgactctgat
gaggaccagtccagagaggccaaacctgatgaccgcatcgtgatgcagtacagacccata
cgcacctcctggagccaactcagtgtggtaaagaagagtggtgtttctgataaactcagc
caggaggagcggaagagacaagaggccatatttgagttgatatcgtcagaacactcctac
ctccacagtctggaggttctgatccggatgtttcagaactcagcagagctcagtgacacc
atgaccaagaccgagcaccaccacctcttctccaacatcacagacgtgtgtgaggccagc
aagaagttctttaaagagttagaggatatacaccagcagaacattgttatagatgacatc
agtgacgtcgtgttcagacacgcccagtccaactttgacccctacatcacctactgctcc
aatgaggtttatcagcagaggaccctacagaagctagtaagtagtaagagtccagtgttt
aaggaggtgttgactcgtattgagggccacccagactgcaggaacctcccaatgatttcc
ttcctgatcctgccgatgcagagagtcacacgcctgcctctgctgatggacgtcatttgt
cagaaggctcctaaggactctgcccagtatgagacctgtaagaaagccctccaatcagtc
agcaaggtggtgcgtcagtgtaacgaaggggcccgtaccatggagagaacagagatgatg
tataccatcaactcccaactggagtttaaaatcaag
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