KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139397363
Entry
139397363         CDS       T10872                                 
Name
(RefSeq) WD repeat domain-containing protein 83
  KO
K13124  mitogen-activated protein kinase organizer 1
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139397363
Spliceosome [BR:ocla03041]
 Complex C
  Other components
   Complex C specific factors
    139397363
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WDR55 Beta-prop_WDR3_2nd WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_HPS5 PQQ_2 WD40_like Beta-prop_WDR75_2nd Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_WDR35_2nd Hira Beta-prop_DCAF12 RCC1_2
Other DBs
NCBI-GeneID: 139397363
NCBI-ProteinID: XP_071000224
LinkDB
Position
Unknown
AA seq 322 aa
MSFPQPKPEVPQLPQNLLRTIDCQQGAVRAVRFNADGNYLLSCGSDKSLKLWSVSRGTLL
KTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVATGQVTRKLRGHAGKVNCVQFNEE
ATVILSGSIDGTVRCWDTRSRKFDPIQILDEAQDGVSSLKVSEHELLTGSVDGRVRRYDL
RMGQLHVDFINSPITCVCFSADGQCTLTSSLDSTVRLLDKSTGEMLGEYTGHKMKGYKLD
CCLSSKDTHVLSCSEDGHVYCWDLVEGSLMLKLPVGKAVVQSLSFHPSETRLLTAMEGRV
QVWGAEPEETEEDVVVVQQEKA
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcgtttccccagcccaaacctgaggtccctcagctcccccaaaaccttctcaggacc
atagactgccaacaaggggctgtaagagctgtgcgattcaatgccgatggtaactacctg
ctgtcttgcggcagtgacaagtctctgaagttgtggagtgtaagtcgagggacactgctg
aagacgtacagtggccatggatacgaggttctagatgctgatggttcctatgacaacagc
cagctgtgttcctgcagctcggacaagacggtgatcctctgggacgtcgccacgggacag
gtcacccggaaactcaggggtcatgctgggaaagtcaactgtgtccagttcaatgaagaa
gctacagtcattttatctggctccatagatgggacagtgcgctgctgggacaccaggtcc
agaaaatttgaccccatccagattctggacgaggctcaagatggtgtcagcagtctgaag
gtgtctgaacacgagctgctcactgggtcagtggacgggagagtgagacggtatgacctg
cggatgggccagctgcatgtggacttcatcaacagccccatcacgtgtgtgtgtttcagt
gcggacggccagtgcactctgacctccagcctggactccaccgtgcgtctactggacaag
agcacaggggagatgctgggagagtacacaggacacaagatgaagggctacaagctggac
tgctgtctgtccagtaaggatactcacgtcctgagctgctctgaagacggacacgtgtac
tgctgggacctggtagagggttctctgatgctgaagctgccagtcgggaaggctgtcgtc
caatcgctgtctttccatccctcggagacccgcctcctcacagccatggaggggcgtgtc
caggtgtggggggcggagccagaggaaactgaagaggacgtggtggttgttcaacaggag
aaagcatag

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