Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139397600
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Entry
139397600 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: T-box brain protein 1-like
KO
K10174
T-box brain protein 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139397600
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Other transcription factors
T-box
139397600
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Ortholog
Paralog
GFIT
Motif
Pfam:
T-box_assoc
T-box
Motif
Other DBs
NCBI-GeneID:
139397600
NCBI-ProteinID:
XP_071000295
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All DBs
Position
3:52943603..52948260
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AA seq
673 aa
AA seq
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MQLENCILPVSVLSKKCLNVGSGYPCSDGSELXQDHTIISASDNLERSSPLKKNSMGMTN
QSEADNFSDSKDASGDVQRGKLSPDLHGVSEIRHNFDGSSGERYILSQSNQPQSVAATPS
AMFPYPSQHGPAHPAFSIGSPSRYMAHHPVITNGAYNSLLTNSSPQGYPTAGYPYAQQYG
HTYQGAAFYQFSSAQAGLVPGKAQVYLCNRALWLKFHRHQTEMIITKQGRRMFPFLSFNI
SGLDPTAHYNIFVDVILADPNHWRFQGGKWVPCGKADTNVTGNRVYMHPDSPNTGAHWMR
QEISFGKLKLTNNKGGSNNTGQMVVLQSLHKYQPRLHVVEVNEDGTEDSSQPGRVQTFTF
PETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDTVYTGCDIDRLTPSPGDSPRSQIMP
GARYAMAGSFLQDQFVSSYAKSRFHPGVGTGPGTDRSVPLSNSLLSPQQTEEPTVASPQR
WFVTPANNRLDFAASAYDAAAAADFAGNAATLLSYAAAGVKALPLPTAGCSSRPLGYYAD
PSGWGTRTPPQYCSKSSPVLSCWPTNSVGGRSGTSNYLVDDADTIPTERSPIGGSDEAKP
KDLSESSWIETPSSIKSIDSSDSGIFEQAKRRRISPSATPVSETQLKSEMLAPRECEKNC
AKDIGYYSFYPHS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgagaattgcatcttgccagttagtgtactatccaagaaatgtctgaatgtg
ggcagtggctacccatgctccgatggatctgagctcnngcaggaccatactattatatct
gctagtgacaacctggagagaagttcacctctgaaaaaaaattccatggggatgacgaat
cagtcagaggcagacaatttttccgactccaaggacgcatcaggggacgtccagagagga
aaactctctcctgatctccacggagtctctgaaattcgtcataatttcgatggatcttca
ggagaaaggtatatcctttctcaatctaaccaaccacagtcagtcgcagcaactccaagt
gctatgttcccctatccgagtcaacatggaccagcgcacccggctttttctattgggagt
ccgagtcgttatatggcccaccatccagtcatcactaatggagcgtacaacagtcttctg
accaacagctccccgcaaggctacccaaccgcgggttacccatacgctcaacagtatgga
cacacttatcaaggagcggcattctaccagttttcctccgcgcaagctgggctggtgcct
gggaaagcgcaggtatatctgtgcaacagggccctgtggctgaagtttcacagacatcaa
acagagatgataatcactaaacaaggacgacggatgttcccctttttgagtttcaacatt
tctggtctcgacccgacggcgcactacaatatatttgtggatgttattcttgctgatcca
aatcactggcgattccaaggtggcaagtgggtgccatgtggcaaagcggatacaaacgtg
acaggaaacagggtgtatatgcaccctgactctccaaacaccggggcgcactggatgcgc
caagaaatctcatttggaaagctgaagttaacgaacaataaaggaggttcaaataacacg
ggacagatggtggttctacaatcccttcacaagtaccaacccaggctccatgtagtggaa
gtcaacgaagatggaaccgaggactccagccaacctggaagagtacaaacgttcactttc
ccagaaacacagtttatcgcagtcacagcataccagaatacagacattacgcagctaaaa
atcgaccacaatccatttgctaaaggatttcgggacaactatgacactgtctacacaggt
tgcgacattgaccggttaacgccatcaccgggtgactcgcctcgctctcagatcatgcct
ggtgcgagatatgccatggctggttctttcctacaggaccaatttgtcagcagttatgcc
aaatctcgctttcaccctggcgtagggactggtcctggcacggaccgcagcgtcccactt
agtaacagcttgctatccccgcaacaaaccgaagaacccacagttgcatccccgcagcga
tggtttgtcacccctgccaataaccgactggactttgccgcctcggcatacgatgccgcc
gcggctgctgattttgcgggtaacgcggccaccctgctgtcatatgcagccgctggagta
aaggcccttcccctgcccactgcagggtgctcaagcagacctctcggttactatgccgac
ccatccggttggggcacacgcacaccaccccagtactgcagtaagtctagtcctgttcta
tcctgctggcccacaaattctgttggcggcagatcaggcacctctaactacctggttgat
gacgccgacaccattccaacagaaaggtcacccatcggagggtccgatgaggcaaaacca
aaagacttatccgaatccagctggatagagacgccgtcttcaatcaagtcgattgattca
agtgattctggtatttttgagcaagccaaacggagaagaatttcaccgtctgccacaccg
gtttcggaaacccagttgaaatctgagatgttggcgccaagagagtgtgagaaaaattgc
gccaaggacattggttactatagtttctatccacacagttaa
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