Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139397644
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Entry
139397644 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05100
Bacterial invasion of epithelial cells
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139397644
05100 Bacterial invasion of epithelial cells
139397644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139397644
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Macropinocytosis
Others
139397644
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139397644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
Motif
Other DBs
NCBI-GeneID:
139397644
NCBI-ProteinID:
XP_071000302
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MEGGNDVDLSNSNITPLWKRRSANHTGPSKLKARPLSYQIDGVHMTDFPVEDNKCSFTLS
QPAERLVATPGGGTVILKHVLNQPTRKTRVVRSISIGHLSKGRFSLSKFKSEDDKSLSLN
SKACHGGSVDNVWSDKPLLDTQNRLSSPFTLTAHRDQIVFGTSPSPLDSASSKHPSPPAS
PNNHHQHDLTSPSSYHPLTPVPSPRNPSPSPPNPSPSTPSLNTPTPSHSSTSSINSLSSL
ISTPSDLPTPHSPSSADMSAPSPSPSHSPTPTLSPYISLSPPPSIVLSTHSAAALKKGTQ
QLIPKGLASLSKASPAGVQSHGMGGLLGLDPTKRALRALSMVETGSFFSTGVGSGGGGTD
QDESTETLKRGLRSTSYRRAVVSGVEMEIPSDDLKTHRLSQPVDPKSHRLSQPVDPKSHR
LSQPVDPKSHRLSQPVDPKSHHLSQPVLKGLQEVKERPTSPGKKNKSPDKKPGLITQRTF
DSEEEELYQNYQEKALHNDSDEDQSREAKPDDRIVMQYRPIRTSWSQLSVVKKSGVSDKL
SQEERKRQEAIFELISSEHSYLHSLEVLIRMFQNSAELSDTMTKTEHHHLFSNITDVCEA
SKKFFKELEDIHQQNIVIDDISDVVFRHAQSNFDPYITYCSNEVYQQRTLQKLVSSKSPV
FKEVLTRIEGHPDCRNLPMISFLILPMQRVTRLPLLMDVICQKAPKDSAQYETCKKALQS
VSKVVRQCNEGARTMERTEMMYTI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgggaacgatgtggatctgtccaacagtaacatcaccccgctatggaagcgg
cgctcagccaatcacactggccccagcaagctaaaggcccggcccctcagctaccagata
gacggagtccacatgactgacttccccgtagaggacaacaagtgcagctttaccctgagc
cagcctgcagagagactggtggccacgccgggaggagggacggtcattctgaagcacgtt
ctcaaccaacccaccaggaaaacacgggtagtcaggagtataagtattggacatctgtcc
aaaggacgtttctctctgtccaagttcaagtcggaggatgataagtcgctgtcgttgaac
agtaaggcatgccacggtgggagtgttgataatgtgtggtcagacaagcctctgctggac
acccagaatcgactatccagcccgttcaccctcaccgctcacagggaccagatagtgttt
gggacgagcccttcaccgctggactctgcctcctccaaacacccctctccccctgcctcc
cccaataaccaccaccaacatgacctgacctccccttcttcctaccaccccttaactcct
gtcccctctccccgtaaccccagcccctctccccctaaccccagcccctccacccctagt
ctcaacacccctaccccatcccacagctccacctccagtatcaactccctctcttccctc
atctccaccccttctgacctccccacaccccacagcccctcctctgctgacatgtctgcc
ccctctccttccccctctcattcccccactcccaccctctctccctacatctctctatct
cctcctccctccattgtcctcagcacccacagtgcagctgccctgaagaagggcacacag
cagctgatccccaaagggctagcgtccctgagcaaggcctctcctgctggggtacagagc
cacggcatggggggtctgctgggcctggatcctaccaagcgggccctgcgagccctcagc
atggtggagactggatccttcttctccactggcgtagggtccgggggaggggggacagac
caggatgagagcactgagactctgaagagagggttgaggtctacctcgtacaggagagca
gtggtaagtggagtggaaatggaaataccatctgatgacctcaagacccatcgtctgtcc
caacctgtagacccaaagagccatcgtctgtcccaacctgtagacccaaagagccatcgt
ctgtcccaacctgtagacccaaagagccatcgtctgtcccaacctgtagacccaaagagc
catcatctgtcccaacctgtgctcaaaggactacaggaggtcaaggagagaccgaccagc
cctgggaagaagaacaagagtcctgataagaagccaggactgatcacacagaggacattt
gacagtgaagaggaggaactgtatcagaactaccaggagaaagctcttcacaatgactct
gatgaggaccagtccagagaggccaaacctgatgaccgcatcgtgatgcagtacagaccc
atacgcacctcctggagccaactcagtgtggtaaagaagagtggtgtttctgataaactc
agccaggaggagcggaagagacaagaggccatatttgagttgatatcgtcagaacactcc
tacctccacagtctggaggttctgatccggatgtttcagaactcagcagagctcagtgac
accatgaccaagaccgagcaccaccacctcttctccaacatcacagacgtgtgtgaggcc
agcaagaagttctttaaagagttagaggatatacaccagcagaacattgttatagatgac
atcagtgacgtcgtgttcagacacgcccagtccaactttgacccctacatcacctactgc
tccaatgaggtttatcagcagaggaccctacagaagctagtaagtagtaagagtccagtg
tttaaggaggtgttgactcgtattgagggccacccagactgcaggaacctcccaatgatt
tccttcctgatcctgccgatgcagagagtcacacgcctgcctctgctgatggacgtcatt
tgtcagaaggctcctaaggactctgcccagtatgagacctgtaagaaagccctccaatca
gtcagcaaggtggtgcgtcagtgtaacgaaggggcccgtaccatggagagaacagagatg
atgtataccatc
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