KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139397809
Entry
139397809         CDS       T10872                                 
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04120  Ubiquitin mediated proteolysis
ocla04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    139397809
   04120 Ubiquitin mediated proteolysis
    139397809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ocla03110]
    139397809
   04131 Membrane trafficking [BR:ocla04131]
    139397809
   04121 Ubiquitin system [BR:ocla04121]
    139397809
Enzymes [BR:ocla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139397809
Chaperones and folding catalysts [BR:ocla03110]
 Other chaperones and cochaperones
  Others
   139397809
Membrane trafficking [BR:ocla04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    139397809
Ubiquitin system [BR:ocla04121]
 Ubiquitin ligases (E3)
  U-box type E3
   139397809
  Multi subunit type E3
   STUB1-CHIC2  complex
    139397809
SSDB
Motif
Pfam: U-box CHIP_TPR_N TPR_1 TPR_2 TPR_16 TPR_8 TPR_17 ANAPC3 TPR_12 TPR_11 TPR_19 TPR_BSK1_C TPR_14 RMD1-3 CFAP70_mid_TPR TPR_9 TPR_6 TPR_7 ARM_TT21_C TPR_CcmH_CycH Coatomer_E CFAP70_TPR_C TPR_Psidin_N Fis1_TPR_C ETO1_C NAD_binding_6 RdRP_head ARM_TT21 SHNi-TPR
Other DBs
NCBI-GeneID: 139397809
NCBI-ProteinID: XP_071000341
LinkDB
Position
Unknown
AA seq 288 aa
MAGSPEKSVSAQEWKEQGNRLFLSRKYQESAACYSKAIKRNPSVSVYYTNRALCHVKLQQ
HDKALADCKQALELDPQSVKALFFLGQCHLEMENYDEAIGNLQRAYNLAKEQRLNFGDDI
PSALRIAKKKRWNSIEEKRINQENELHAYLTKLILAEKERELDDSREEQDAKSEECRSRH
DLTKFPSKHDKHLSDMEELFSQLDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRK
DIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIMENGWVEDY
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcgggcagccctgagaagagtgtctcagcgcaggagtggaaggagcagggcaaccgc
ctcttcctcagccgcaagtaccaggagtcggccgcctgctacagcaaagccatcaagcga
aacccctcagtgtctgtgtactacaccaaccgggcactgtgccacgtgaagctgcagcaa
cacgacaaggccctggccgactgcaagcaggcgctggagctggacccccagtcagtcaag
gccctcttcttcctgggtcagtgtcacctggagatggagaactacgacgaagccatcggc
aacctgcagagagcatataacctggcgaaagagcaacggttgaactttggtgacgacatt
cccagtgccctccggatagccaagaagaagcgctggaacagcatcgaggagaagcgcatt
aaccaggagaacgagctgcacgcctatctcaccaaactcatcctggcagagaaggagagg
gaactggatgacagcagagaggaacaagacgccaagtcggaggaatgcagaagccgacac
gacctcactaagttcccctccaaacacgacaagcacctgtcagacatggaggagctcttc
tctcagctggatgagaagaggaagaagagggagatcccagactacctgtgtggaaagatc
agctttgagttgatgagggagccctgcattacacccagtgggatcacttacgaccgcaaa
gacatcgaggagcacctacagcgagtgggccattttgacccggtgacacgcagccctctg
actcaagaccagctgattcctaatctggccatgaaagaggtcatcgatgctttcatcatg
gagaatggatgggtggaggactactga

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