Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139398196
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Entry
139398196 CDS
T10872
Name
(RefSeq) DNA topoisomerase 1-like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139398196
Enzymes [BR:
ocla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139398196
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Topoisomerases
139398196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
139398196
NCBI-ProteinID:
XP_071000418
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
EMTSEEKSKITDINKCNFTEMSEYFKAQSEARKQMSKDEKLKIKEENERILQEYGFCVMD
NHKERIGNFRIEPPGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPQGTRWKEV
RHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVERLRAQYRED
WKSKEMRVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYSKMDDQEYV
VEFDFLGKDSIRYYNKMPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGL
TAKVFRTYNASITLQQQLKELTSPDESIPAKILSYNRANRAVAILCNHQRAAPKTFEKSM
QNLQTKIDEKQKQLSATRKQLKGAKTEHKASHDDRSKKMVEVKRKAVQRIEEQLMKLQMQ
ATDREENKQIALGTSKLNYLDPRISVAWVKKWDVPMEKIYNKTQREKFAWAIDMAEEDYE
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gaaatgacatcggaggagaagtcaaagatcacagatataaacaagtgtaacttcacggag
atgagcgagtacttcaaggcccaatcagaggcccggaaacagatgtccaaagatgagaaa
ctgaaaatcaaagaggagaatgagcgtatcctccaggagtatggtttctgtgtgatggac
aaccataaggagcgaattggaaactttcgcatcgagcctcccggtctgttcagggggcgt
ggggaccacccaaagatgggcatgctgaaacgccgcatccgccctgaagacatcattatc
aactgcagcaaagactccaagcaccccaagccgccccagggcacgcgctggaaggaggtt
cgtcatgacaacaaggtcacatggctggtgtcgtggactgagaacatccagggttctatt
aagtacatcatgctcaaccccagttccagaatcaagggcgagaaggactggcagaagtat
gagacagcccggaggctgaagaagtgtgtggagcgcctgagggcccagtacagagaggac
tggaagtctaaagagatgagggtcagacagagagctgtggctctctacttcatagacaag
ctggccttgagggcggggaatgagaaggaggagggggagacggctgatacggttggctgc
tgctccctgagggtggaacacatcaagctgtactccaagatggacgaccaggagtacgtg
gtggagtttgacttcctagggaaagactccatcagatactacaacaagatgcctgtggag
aagagggtgtttaagaacctgcagctgttcttggagaataagcagcccgaggatgacctc
ttcgacagactcaatacctctattctgaataagcacctccaggagttgatggacgggttg
acagccaaagtgttccgtacgtacaatgcctccatcaccctgcagcagcagctcaaagag
ctcaccagcccggatgagagcattcctgctaagatcctgtcctacaacagagccaaccgg
gctgtggctatactgtgcaaccaccagagggctgcacctaagacctttgagaagtccatg
cagaacctgcaaaccaagatagacgagaagcagaagcagctgtctgccaccaggaaacag
ctgaagggggcaaagacagagcacaaggcctcacatgatgaccgaagtaaaaagatggtg
gaggtgaagaggaaagcggtccagaggatagaggaacaactgatgaagctacagatgcag
gccacagacagagaggagaacaagcagatcgcactgggaacctccaaactcaactacctg
gacccacgcatctctgtggcatgggttaagaaatgggacgttcccatggagaagatttac
aacaaaacccagagggagaagtttgcctgggccatcgacatggctgaagaggactacgag
ttttag
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