Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139398351
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Entry
139398351 CDS
T10872
Name
(RefSeq) DNA repair protein XRCC4-like
KO
K10886
DNA-repair protein XRCC4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
139398351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139398351
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
139398351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
GhoS
DUF7653
BRE1B
HAP1_N
ZapB
Motif
Other DBs
NCBI-GeneID:
139398351
NCBI-ProteinID:
XP_071000502
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MSVVSENAEREEAEELEVQTERYIQDLQQALSGTGTSSTDYSFTLTSNPGPGAQMNSFPS
PILPLSIPSLSLLGSVLFCEVPEPVEEVRVLLTHGLERGTPLQNFNHSLKEENHRLRHEL
QHINADGTSVVRRLESELYSRFFLVLNDKKAKIHSLQENTTHLQETSMEGTLRSRSPLDD
SLNYITDMVPCRKRHFRHLQPPDTVAKRPTPEPAQKQTY
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagtatcagagaatgcagagagggaggaggcagaggagttggaagtgcagaca
gaacgttacatccaagacctccagcaggccctgagtgggactggaacctcctctactgac
tacagcttcaccttgacctctaaccccggcccaggtgcacagatgaactctttcccttcc
ccaatcttgcccctgtctatcccatccctctccctcctgggttctgtgttgttttgtgag
gttccagagccagtggaggaggtcagagtgttactgactcacggtctagaacgtggaacc
ccactgcagaacttcaaccactcactaaaggaggagaaccacagactcagacatgagcta
caacacatcaatgctgatggtacatcagtggtaaggagactagagtcagagctgtactct
cgctttttcctggtgttgaatgacaagaaagccaagatacacagtctacaggagaacacc
acacacctgcaggagaccagtatggaagggacattgcgtagccgaagcccattggacgac
agtctgaattacatcacagacatggtgccctgccgtaaacgccacttccgtcacctgcaa
cctcctgacacggttgctaagagaccaaccccagagccagcgcagaaacagacatactga
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